RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 FAM117BQ6P1L5 589 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CRELD2Q6UXH1 353 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 ALKAL1Q6UXT8 129 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 WDR49Q8IV35 697 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 DEFB123Q8N688 67 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 GSTCDQ8NEC7 633 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 SNX27Q96L92 541 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 ACAP3Q96P50 834 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CDX2Q99626 313 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CBWD1Q9BRT8 395 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 TCHPQ9BT92 498 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 EIF2AQ9BY44 585 aaKnown RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CWH43Q9H720 699 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 VIPAS39Q9H9C1 493 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 SLC38A7Q9NVC3 462 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 ANKFY1Q9P2R3 1169 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 STK39Q9UEW8 545 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 MSRAQ9UJ68 235 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 IPPQ9Y573 584 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 PCDHB2Q9Y5E7 798 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 DUSP10Q9Y6W6 482 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 A0A087X0T9 212 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 C5orf67F2Z3F1 127 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 STK25O00506 426 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 ZNF185O15231 689 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 B4GALT3O60512 393 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 PALMO75781 387 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 UPP2O95045 317 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
LRRC28-211ENST00000558890 H2AFZP0C0S5 128 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 FAM228BP0C875 321 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 FGFR1P11362 822 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CASP4P49662 377 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CYP24A1Q07973 514 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 GRIK3Q13003 919 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CAMK1Q14012 370 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 EEF1DP3Q658K8 133 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 C8orf74Q6P047 294 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 GLB1LQ6UWU2 654 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 H2AFVQ71UI9 128 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CREG2Q8IUH2 290 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 HS6ST3Q8IZP7 471 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 SYCE1Q8N0S2 351 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 GOLGA6L1Q8N7Z2 621 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 FAM71BQ8TC56 605 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 PARD3BQ8TEW8 1205 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CPB2Q96IY4 423 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 UROC1Q96N76 676 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 UBXN6Q9BZV1 441 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 HAPLN2Q9GZV7 340 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 INTS2Q9H0H0 1204 aaKnown RBP8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CXCL16Q9H2A7 254 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.1
LRRC28-211ENST00000558890 MED4Q9NPJ6 270 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 ST7Q9NRC1 585 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 MIOSQ9NXC5 875 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 RBAKQ9NYW8 714 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-211ENST00000558890 HCSTQ9UBK5 93 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 ADAMTS1Q9UHI8 967 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 INTUQ9ULD6 942 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 L1RE1Q9UN81 338 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 PCDHGC5Q9Y5F6 944 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 GBF1Q92538 1859 aa8.21□□□□□ -1.1
LRRC28-211ENST00000558890 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 TMEM189-UBE2V1I3L0A0 370 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 RFXAPO00287 272 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 CES2O00748 559 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 NCK2O43639 380 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 ZC3H11AO75152 810 aaKnown RBP eCLIP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 NPTXRO95502 500 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 EFEMP2O95967 443 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 FAM163BP0C2L3 166 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 ITGA4P13612 1032 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 SOX5P35711 763 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 BMPR1AP36894 532 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 MATR3P43243 847 aaKnown RBP eCLIP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 NOP2P46087 812 aaKnown RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 FMO5P49326 533 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 VAMP7P51809 220 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 JAM2P57087 298 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 TNNC1P63316 161 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 APBA1Q02410 837 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 PTK2Q05397 1052 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 RPS6KA1Q15418 735 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 ZBTB6Q15916 424 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 GLE1Q53GS7 698 aaKnown RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 ZNF571Q7Z3V5 609 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 CDR2LQ86X02 465 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 CMTR2Q8IYT2 770 aaKnown RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 SPATA4Q8NEY3 305 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 SPATA18Q8TC71 538 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 COG1Q8WTW3 980 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 LPPQ93052 612 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 FAM81BQ96LP2 452 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 FNBP1Q96RU3 617 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 CGRRF1Q99675 332 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 FAM213AQ9BRX8 229 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 C17orf80Q9BSJ5 609 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms