RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RAP2BP61225 183 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 SATB1Q01826 763 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 UBXN2BQ14CS0 331 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 INO80DQ53TQ3 878 aaPredicted RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 SPTY2D1Q68D10 685 aaPredicted RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 ERAP2Q6P179 960 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 PGBD2Q6P3X8 592 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 SESTD1Q86VW0 696 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 FITM2Q8N6M3 262 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 ATP11CQ8NB49 1132 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 FANCBQ8NB91 859 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 POF1BQ8WVV4 589 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 IQCDQ96DY2 449 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 P2RX7Q99572 595 aaKnown RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 WDR12Q9GZL7 423 aaKnown RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 PTPRHQ9HD43 1115 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 GPRC5BQ9NZH0 403 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 CPNE7Q9UBL6 633 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.33□□□□□ -1.563e-6■■□□□ 12.1
CASC4-206ENST00000558847 A0A1W2PPC4 97 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 HNRNPDLO14979 420 aaKnown RBP5.32□□□□□ -1.56
CASC4-206ENST00000558847 ADAMTS3O15072 1205 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 ABHD16AO95870 558 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 ANXA2P07355 339 aaKnown RBP5.32□□□□□ -1.56
CASC4-206ENST00000558847 CYP2C9P11712 490 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 TYRP1P17643 537 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 HDCP19113 662 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 TRAPPC10P48553 1259 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 HHEXQ03014 270 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 ICA1Q05084 483 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 FAM214AQ32MH5 1076 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 DCAF17Q5H9S7 520 aaPredicted RBP5.32□□□□□ -1.56
CASC4-206ENST00000558847 MIIPQ5JXC2 388 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 COL23A1Q86Y22 540 aaPredicted RBP5.32□□□□□ -1.56
CASC4-206ENST00000558847 SYTL1Q8IYJ3 562 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 ANKRD35Q8N283 1001 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 SLC35B2Q8TB61 432 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 ST8SIA2Q92186 375 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 EXTL1Q92935 676 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 LTV1Q96GA3 475 aaPredicted RBP5.32□□□□□ -1.56
CASC4-206ENST00000558847 FAM89AQ96GI7 184 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 TMEM41AQ96HV5 264 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 CPPED1Q9BRF8 314 aaPredicted RBP5.32□□□□□ -1.56
CASC4-206ENST00000558847 CNPPD1Q9BV87 410 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 PPCSQ9HAB8 311 aa5.32□□□□□ -1.56
CASC4-206ENST00000558847 GRPP07492 148 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 SBK3P0C264 359 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 ACRV1P26436 265 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 MAPK10P53779 464 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 PIGFQ07326 219 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 GRM1Q13255 1194 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 STARD3Q14849 445 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 LSM12Q3MHD2 195 aaKnown RBP5.31□□□□□ -1.56
CASC4-206ENST00000558847 ARL13BQ3SXY8 428 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 C1QL3Q5VWW1 255 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 HIBCHQ6NVY1 386 aaPredicted RBP5.31□□□□□ -1.56
CASC4-206ENST00000558847 GPRIN1Q7Z2K8 1008 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 UBE3BQ7Z3V4 1068 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 LIX1LQ8IVB5 337 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 C1orf210Q8IVY1 113 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 ANKRD42Q8N9B4 389 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 SPATA5Q8NB90 893 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 SMCR8Q8TEV9 937 aaPredicted RBP5.31□□□□□ -1.56
CASC4-206ENST00000558847 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 ZNF503Q96F45 646 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 SNX22Q96L94 193 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 MYOCQ99972 504 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 CRB3Q9BUF7 120 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 GSTO2Q9H4Y5 243 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 ZSCAN32Q9NX65 697 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 STK32BQ9NY57 414 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 COL20A1Q9P218 1284 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 FNIP2Q9P278 1114 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 MYO1AQ9UBC5 1043 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
CASC4-206ENST00000558847 A0A087WWL8 130 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 CLCA1A8K7I4 914 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 CYP27B1O15528 508 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 IDEP14735 1019 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 ABCB4P21439 1286 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 MCM7P33993 719 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 RABGGTBP53611 331 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 WNT3P56703 355 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 PSMC1P62191 440 aaKnown RBP5.3□□□□□ -1.56
CASC4-206ENST00000558847 RPS16P62249 146 aaKnown RBP5.3□□□□□ -1.56
CASC4-206ENST00000558847 TCF15Q12870 199 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 PMS2P11Q13670 270 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 ELAVL1Q15717 326 aaKnown RBP5.3□□□□□ -1.56
CASC4-206ENST00000558847 TMEM95Q3KNT9 176 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 UTP14CQ5TAP6 766 aaKnown RBP5.3□□□□□ -1.56
CASC4-206ENST00000558847 FAM160B1Q5W0V3 765 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 CATSPERGQ6ZRH7 1159 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 HTR3DQ70Z44 454 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 RNF44Q7L0R7 432 aa5.3□□□□□ -1.56
CASC4-206ENST00000558847 USP37Q86T82 979 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms