RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CACNA1HO95180 2353 aa13.5□□□□□ -0.25
SMAD3-208ENST00000558827 KLRC4O43908 158 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 MOSPD3O75425 235 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 SLFN14P0C7P3 912 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
SMAD3-208ENST00000558827 CMA1P23946 247 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 NDUFA8P51970 172 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
SMAD3-208ENST00000558827 GRM2Q14416 872 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 TEAD2Q15562 447 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 MGAT5BQ3V5L5 792 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 PRSS36Q5K4E3 855 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 SDHAF4Q5VUM1 108 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 OSTM1Q86WC4 334 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 FSIP1Q8NA03 581 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 ZCWPW1Q9H0M4 648 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 ZNF334Q9HCZ1 680 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-208ENST00000558827 AGPAT3Q9NRZ7 376 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 TMLHEQ9NVH6 421 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 ABI2Q9NYB9 513 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-208ENST00000558827 L1RE1Q9UN81 338 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 SNX9Q9Y5X1 595 aa13.49□□□□□ -0.25
SMAD3-208ENST00000558827 A0A1W2PRU2 124 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 EIF3DO15371 548 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMAD3-208ENST00000558827 LRRN2O75325 713 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 CYP11A1P05108 521 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 POU2F2P09086 479 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 CD72P21854 359 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 VIPR2P41587 438 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 SYKP43405 635 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 ALDH1A3P47895 512 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 CASP4P49662 377 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 GPR15P49685 360 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 EPHB3P54753 998 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 RBP5P82980 135 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 EHHADHQ08426 723 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 STK4Q13043 487 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 MYBPC2Q14324 1141 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 FAM78AQ5JUQ0 283 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 STXBP5Q5T5C0 1151 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 MTSS1LQ765P7 747 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-208ENST00000558827 PDCL2Q8N4E4 241 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 SHKBP1Q8TBC3 707 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 NXPE3Q969Y0 559 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 ANKRD36BP1Q96IX9 119 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 ZNF560Q96MR9 790 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 PI4K2AQ9BTU6 479 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 FOXQ1Q9C009 403 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 GOLPH3LQ9H4A5 285 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 SLITRK6Q9H5Y7 841 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 TBC1D17Q9HA65 648 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 MAGEF1Q9HAY2 307 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 ASAH2Q9NR71 780 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 INTS13Q9NVM9 706 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-208ENST00000558827 ZFP37Q9Y6Q3 630 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-208ENST00000558827 TSC2P49815 1807 aa13.48□□□□□ -0.25
SMAD3-208ENST00000558827 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 ZNF197O14709 1029 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 HUS1O60921 280 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 TNNC2P02585 160 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 DCNP07585 359 aaKnown RBP13.47□□□□□ -0.25
SMAD3-208ENST00000558827 TNNI1P19237 187 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 POU5F1Q01860 360 aaKnown RBP13.47□□□□□ -0.25
SMAD3-208ENST00000558827 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
SMAD3-208ENST00000558827 RTL10Q7L3V2 364 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 NT5DC4Q86YG4 428 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 CXorf38Q8TB03 319 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 ATOH1Q92858 354 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-208ENST00000558827 ARHGEF3Q9NR81 526 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 EXOC1Q9NV70 894 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
SMAD3-208ENST00000558827 DSEQ9UL01 958 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 MAPK8IP1Q9UQF2 711 aa13.47□□□□□ -0.25
SMAD3-208ENST00000558827 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
SMAD3-208ENST00000558827 EXOC3O60645 756 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 ATP2C2O75185 946 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 CLSTN1O94985 981 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-208ENST00000558827 PDGFRBP09619 1106 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 AOC1P19801 751 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 PTPN5P54829 565 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 CYP4F8P98187 520 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 CYP24A1Q07973 514 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 PLD1Q13393 1074 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 TMC8Q8IU68 726 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 XXYLT1Q8NBI6 393 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 KIAA0895Q8NCT3 520 aa13.46□□□□□ -0.25
SMAD3-208ENST00000558827 ZSCAN18Q8TBC5 510 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms