RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CAVIN2O95810 425 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 ADH1AP07327 375 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 CDK11BP21127 795 aaKnown RBP18.69■□□□□ 0.58
TPM1-214ENST00000558544 KLRC2P26717 231 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 ZNF445P59923 1031 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 CETN1Q12798 172 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 VWA3BQ502W6 1294 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 WDR44Q5JSH3 913 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 DPH6Q7L8W6 267 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 LIMS2Q7Z4I7 341 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 TMEM86AQ8N2M4 240 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 FAM200AQ8TCP9 573 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 KBTBD7Q8WVZ9 684 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 MRPL45Q9BRJ2 306 aaKnown RBP18.69■□□□□ 0.58
TPM1-214ENST00000558544 NDST4Q9H3R1 872 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 XIRP2A4UGR9 3374 aa18.69■□□□□ 0.58
TPM1-214ENST00000558544 TBC1D4O60343 1298 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 ATP1A3P13637 1013 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 P4HA1P13674 534 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 OR1D2P34982 312 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 ASPAP45381 313 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 ARPP19P56211 112 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 RBM10P98175 930 aaKnown RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 LRMPQ12912 555 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 LLGL2Q6P1M3 1020 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 PALB2Q86YC2 1186 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 OR10T2Q8NGX3 314 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 CDCA3Q99618 268 aaPredicted RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 RTP3Q9BQQ7 232 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 NIF3L1Q9GZT8 377 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 SDCBP2Q9H190 292 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 VPS16Q9H269 839 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 DDX43Q9NXZ2 648 aaKnown RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 GCNT4Q9P109 453 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 STXBP5LQ9Y2K9 1186 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 PTPRDP23468 1912 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 BRWD1Q9NSI6 2320 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 LINC01565O15544 149 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 HCRTO43612 131 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 TACC1O75410 805 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 OR4Q2P0C623 313 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 CPB1P15086 417 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 WARSP23381 471 aaKnown RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 CLCN4P51793 760 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 CDH8P55286 799 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 ROR1Q01973 937 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 SLC8B1Q6J4K2 584 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 THEM5Q8N1Q8 247 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 VN1R2Q8NFZ6 395 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 MAFAQ8NHW3 353 aaPredicted RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 LMO3Q8TAP4 145 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 TATDN2Q93075 761 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 TMEM209Q96SK2 561 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 CRACR2AQ9BSW2 395 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 INTS2Q9H0H0 1204 aaKnown RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 LIMA1Q9UHB6 759 aaKnown RBP18.68■□□□□ 0.58
TPM1-214ENST00000558544 HCFC2Q9Y5Z7 792 aa18.68■□□□□ 0.58
TPM1-214ENST00000558544 OR6C75A6NL08 312 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 GABRDO14764 452 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 TGM5O43548 720 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 GLUD1P00367 558 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 TPM2P07951 284 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 EPCAMP16422 314 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 ACAT1P24752 427 aaKnown RBP18.67■□□□□ 0.58
TPM1-214ENST00000558544 LHX1P48742 406 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 COPB1P53618 953 aaKnown RBP18.67■□□□□ 0.58
TPM1-214ENST00000558544 SKIV2LQ15477 1246 aaKnown RBP18.67■□□□□ 0.58
TPM1-214ENST00000558544 GBP6Q6ZN66 633 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 PPFIBP1Q86W92 1011 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 EFHBQ8N7U6 833 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 EHBP1Q8NDI1 1231 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 SPATA18Q8TC71 538 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 BCO2Q9BYV7 579 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 NME7Q9Y5B8 376 aa18.67■□□□□ 0.58
TPM1-214ENST00000558544 MYH10P35580 1976 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 WDR27A2RRH5 827 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 GOLGA6L19H0YKK7 550 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 GLP2RO95838 553 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 WEE2P0C1S8 567 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 SPATA31D3P0C874 917 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 LMO2P25791 158 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 TPM4P67936 248 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 RAB33AQ14088 237 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 EXOC3L4Q17RC7 722 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 EP400NLQ6ZTU2 488 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 SPATA31D4Q6ZUB0 917 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 OR6B3Q8NGW1 331 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 SLC22A17Q8WUG5 538 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 NT5C1BQ96P26 610 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 ARID3AQ99856 593 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 OXCT2Q9BYC2 517 aaPredicted RBP18.66■□□□□ 0.58
TPM1-214ENST00000558544 SNX25Q9H3E2 840 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 CLDND1Q9NY35 253 aa18.66■□□□□ 0.58
TPM1-214ENST00000558544 C2orf16Q68DN1 1984 aa18.65■□□□□ 0.58
TPM1-214ENST00000558544 FSD2A1L4K1 749 aa18.65■□□□□ 0.58
TPM1-214ENST00000558544 GTPBP10A4D1E9 387 aaKnown RBP18.65■□□□□ 0.58
TPM1-214ENST00000558544 SLC9A1P19634 815 aa18.65■□□□□ 0.58
TPM1-214ENST00000558544 GNL1P36915 607 aaPredicted RBP18.65■□□□□ 0.58
TPM1-214ENST00000558544 TSPY1Q01534 308 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms