RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ZFPM1Q8IX07 1006 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 TXLNBQ8N3L3 684 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 ANKRD44Q8N8A2 993 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 CCDC112Q8NEF3 446 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 CPT1CQ8TCG5 803 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 NRG4Q8WWG1 115 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 TFAP2CQ92754 450 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 UHRF1Q96T88 793 aaPredicted RBP3.71□□□□□ -1.82
HERC1-203ENST00000558532 SPON1Q9HCB6 807 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 ZNF446Q9NWS9 450 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 MKS1Q9NXB0 559 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 POLKQ9UBT6 870 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 SRRDQ9UH36 339 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 SLC23A1Q9UHI7 598 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 AJAP1Q9UKB5 411 aaPredicted RBP3.71□□□□□ -1.82
HERC1-203ENST00000558532 ZBTB21Q9ULJ3 1066 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 DNM3Q9UQ16 869 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 CLCA2Q9UQC9 943 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 HDAC5Q9UQL6 1122 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 RRP7AQ9Y3A4 280 aaKnown RBP3.71□□□□□ -1.82
HERC1-203ENST00000558532 MSH6P52701 1360 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 PLEKHG2Q9H7P9 1386 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 MYH15Q9Y2K3 1946 aa3.71□□□□□ -1.82
HERC1-203ENST00000558532 ATP7AQ04656 1500 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 SHTN1A0MZ66 631 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 PLEKHD1A6NEE1 506 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 FAM171A2A8MVW0 826 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 CLGNO14967 610 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ERC2O15083 957 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ZNF185O15231 689 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 DHX16O60231 1041 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 NDUFS2O75306 463 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 RPS6KA4O75676 772 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 SCAF4O95104 1147 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 AMY1AP04745 511 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ZNF853P0CG23 659 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 TNNT1P13805 278 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 CASQ1P31415 396 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 MTHFSP49914 203 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 HNRNPMP52272 730 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC1-203ENST00000558532 PER3P56645 1201 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 CLRN1P58418 232 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 NHLH2Q02577 135 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ABHD18Q0P651 414 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 MTM1Q13496 603 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ODF1Q14990 250 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 CCDC93Q567U6 631 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 FAM102AQ5T9C2 384 aaPredicted RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 ICE2Q659A1 982 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ZSCAN25Q6NSZ9 544 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 CASC1Q6TDU7 716 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 FAM180AQ6UWF9 173 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 Q6ZPA2 131 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 MORC1Q86VD1 984 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 SUGP1Q8IWZ8 645 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 FAM177A1Q8N128 213 aaPredicted RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 ZNF276Q8N554 614 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 PPM1NQ8N819 430 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 SLC25A43Q8WUT9 341 aaPredicted RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 CASKIN2Q8WXE0 1202 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 STON2Q8WXE9 905 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 LARP4BQ92615 738 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 DPF2Q92785 391 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 SECISBP2LQ93073 1101 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 TSR2Q969E8 191 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 ZNF622Q969S3 477 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC1-203ENST00000558532 CLIP3Q96DZ5 547 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 FUBP3Q96I24 572 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC1-203ENST00000558532 TEKT5Q96M29 485 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 NCAPGQ9BPX3 1015 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 TEX101Q9BY14 249 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 BRINP2Q9C0B6 783 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 EIF2B4Q9UI10 523 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 ZNF215Q9UL58 517 aaPredicted RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 ACTL7AQ9Y615 435 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 V9GYY5 206 aaPredicted RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 ARHGEF10O15013 1369 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 MED1Q15648 1581 aaPredicted RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 UGGT1Q9NYU2 1555 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 FAM208AQ9UK61 1670 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 POLR2AP24928 1970 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 XRN1Q8IZH2 1706 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 LRRC37A3O60309 1634 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 SPAG9O60271 1321 aaKnown RBP3.7□□□□□ -1.82
HERC1-203ENST00000558532 AOX1Q06278 1338 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 TTC21AQ8NDW8 1320 aa3.7□□□□□ -1.82
HERC1-203ENST00000558532 ERCC6L2Q5T890 1561 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 PXDNLA1KZ92 1463 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 ANKRD62A6NC57 917 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 KLHL33A6NCF5 533 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 DRGXA6NNA5 263 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 MYO1CO00159 1063 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 XPOTO43592 962 aaKnown RBP3.69□□□□□ -1.82
HERC1-203ENST00000558532 GPR32O75388 356 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 SLU7O95391 586 aaKnown RBP3.69□□□□□ -1.82
HERC1-203ENST00000558532 SNRPA1P09661 255 aaKnown RBP3.69□□□□□ -1.82
HERC1-203ENST00000558532 PNMA6AP0CW24 399 aaPredicted RBP3.69□□□□□ -1.82
HERC1-203ENST00000558532 CCDC192P0DO97 292 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 RAP2AP10114 183 aa3.69□□□□□ -1.82
HERC1-203ENST00000558532 IL2RBP14784 551 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms