RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SLC38A7Q9NVC3 462 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 THG1LQ9NWX6 298 aaKnown RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 ANKFY1Q9P2R3 1169 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 EVLQ9UI08 416 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 NUB1Q9Y5A7 615 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 BPTFQ12830 3046 aa7.4□□□□□ -1.23
LRRC28-207ENST00000558500 WDFY3Q8IZQ1 3526 aa7.4□□□□□ -1.23
LRRC28-207ENST00000558500 CACNA1EQ15878 2313 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 TDRD15B5MCY1 1934 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 TICRRQ7Z2Z1 1910 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 A0A087WWV3 80 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 CCDC194A0A1B0GVG4 234 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 BAG4O95429 457 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 FGF19O95750 216 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 XRCC6P12956 609 aaKnown RBP eCLIP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 LIG1P18858 919 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 DRD1P21728 446 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 PDIA3P30101 505 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 RPL9P32969 192 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 DGKEP52429 567 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 YARSP54577 528 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 SSRP1Q08945 709 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 LMAN2Q12907 356 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 DUSP4Q13115 394 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 RUNX3Q13761 415 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 DMC1Q14565 340 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 FBXO43Q4G163 708 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 USP39Q53GS9 565 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ARHGAP15Q53QZ3 475 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 GPR158Q5T848 1215 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ATF7IP2Q5U623 682 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ALKAL1Q6UXT8 129 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 CEP120Q8N960 986 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 MCPH1Q8NEM0 835 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 BSNDQ8WZ55 320 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ZMAT2Q96NC0 199 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 BBC3Q96PG8 261 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 NAP1L4Q99733 375 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ARID3AQ99856 593 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 AGXT2Q9BYV1 514 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 CRISPLD1Q9H336 500 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ATXN3LQ9H3M9 355 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 TASP1Q9H6P5 420 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 FBRSL1Q9HCM7 1045 aaKnown RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 HPS4Q9NQG7 708 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 TOPORSQ9NS56 1045 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-207ENST00000558500 GKN1Q9NS71 199 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 INVSQ9Y283 1065 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 ASB3Q9Y575 518 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 VWA8A3KMH1 1905 aa7.39□□□□□ -1.23
LRRC28-207ENST00000558500 NAV2Q8IVL1 2488 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 OTOL1A6NHN0 477 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 UPK3BL1B0FP48 263 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 UPK3BL2E5RIL1 263 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 DEXIO95424 95 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 OR4Q2P0C623 313 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 ATP2B1P20020 1258 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 BCKDHBP21953 392 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 GABRR2P28476 465 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 MCM4P33991 863 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 RDXP35241 583 aaKnown RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 GRM5P41594 1212 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 NAMPTP43490 491 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 MAPK8P45983 427 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 ALDH1A3P47895 512 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 GALK1P51570 392 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 EVCP57679 992 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 CYP4F8P98187 520 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 AMPD2Q01433 879 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 SCAPQ12770 1279 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 SEMA3BQ13214 749 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 TSR1Q2NL82 804 aaKnown RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 TRIM61Q5EBN2 209 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 NT5DC1Q5TFE4 455 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 TRIM68Q6AZZ1 485 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 APBB1IPQ7Z5R6 666 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 DNAJB7Q7Z6W7 309 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 TSTD1Q8NFU3 115 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 RPLP0P6Q8NHW5 317 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 PIGKQ92643 395 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 PSMG2Q969U7 264 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 ACDQ96AP0 544 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 JAKMIP1Q96N16 626 aaKnown RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 AIFM3Q96NN9 605 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 PGLYRP2Q96PD5 576 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 P2RY13Q9BPV8 354 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 POLR3CQ9BUI4 534 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 CCDC94Q9BW85 323 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 OXCT2Q9BYC2 517 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 SMG9Q9H0W8 520 aaKnown RBP7.38□□□□□ -1.23
LRRC28-207ENST00000558500 EBF3Q9H4W6 596 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 PCDHA12Q9UN75 941 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 KCNJ14Q9UNX9 436 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms