RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 MTMR12Q9C0I1 747 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 ZDHHC3Q9NYG2 299 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 CDC23Q9UJX2 597 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 NUB1Q9Y5A7 615 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 PCDHGC4Q9Y5F7 938 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 A0A1B0GUA9 196 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 FAM170AA1A519 330 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 C17orf102A2RUQ5 167 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 GRID2IPA4D2P6 1211 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 POM121CA8CG34 1229 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 BTNL10A8MVZ5 291 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 SEPT4O43236 478 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 BUB1O43683 1085 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 ADAMTS4O75173 837 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 TADA3O75528 432 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 TRPA1O75762 1119 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 MMEP08473 750 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 NFICP08651 508 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 CLTAP09496 248 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 H2AFZP0C0S5 128 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 BMP4P12644 408 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 DARSP14868 501 aaKnown RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 CYP11B1P15538 503 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 TNFAIP3P21580 790 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 FGFR3P22607 806 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 USP8P40818 1118 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 AP3M2P53677 418 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 GALCP54803 685 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 MYL6P60660 151 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 NOP14P78316 857 aaKnown RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 HTRA3P83110 453 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 FMO1Q01740 532 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 SURF1Q15526 300 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 DUOXA2Q1HG44 320 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 SLC10A6Q3KNW5 377 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 ARSJQ5FYB0 599 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 TAF3Q5VWG9 929 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 PAPD7Q5XG87 772 aaKnown RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 CCSAPQ6IQ19 270 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 CXCL17Q6UXB2 119 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 H2AFVQ71UI9 128 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 ENOSF1Q7L5Y1 443 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 DEPDC4Q8N2C3 294 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 RNF10Q8N5U6 811 aaKnown RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPG11-204ENST00000557866 KLHDC9Q8NEP7 349 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 CXorf38Q8TB03 319 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 CD99L2Q8TCZ2 262 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 TMEM40Q8WWA1 233 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 ABHD17AQ96GS6 310 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 ERO1AQ96HE7 468 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 MTG1Q9BT17 334 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 KATNAL1Q9BW62 490 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 GCOM2Q9BZD3 368 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 XYLT2Q9H1B5 865 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 CXCL16Q9H2A7 254 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 RPF1Q9H9Y2 349 aaKnown RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPG11-204ENST00000557866 SRRDQ9UH36 339 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 SIX4Q9UIU6 781 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 DNMT3AQ9Y6K1 912 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 V9GYY5 206 aaPredicted RBP7.91□□□□□ -1.14
SPG11-204ENST00000557866 ATP8B3O60423 1300 aa7.91□□□□□ -1.14
SPG11-204ENST00000557866 ZSWIM8A7E2V4 1837 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 GRIN2DO15399 1336 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 A0A1W2PNR3 127 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 TMCO5BA8MYB1 307 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 DYNC1I1O14576 645 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 KPNA6O60684 536 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 SRGAP2O75044 1071 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 PHACTR2O75167 634 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 TACC1O75410 805 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 PALMO75781 387 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 IL18RAPO95256 599 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 NPTXRO95502 500 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 ASS1P00966 412 aaKnown RBP7.9□□□□□ -1.14
SPG11-204ENST00000557866 CCDC172P0C7W6 258 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 RARBP10826 455 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 KRT5P13647 590 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 ATP1A2P50993 1020 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 TFAMQ00059 246 aaKnown RBP7.9□□□□□ -1.14
SPG11-204ENST00000557866 CDC42EP1Q00587 391 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 POU5F1Q01860 360 aaKnown RBP7.9□□□□□ -1.14
SPG11-204ENST00000557866 NCBP1Q09161 790 aaKnown RBP7.9□□□□□ -1.14
SPG11-204ENST00000557866 CUL2Q13617 745 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 SNX17Q15036 470 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 MAP3K21Q5TCX8 1036 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 JADE1Q6IE81 842 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 GDF6Q6KF10 455 aaPredicted RBP7.9□□□□□ -1.14
SPG11-204ENST00000557866 VPS36Q86VN1 386 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 FMNL3Q8IVF7 1028 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 GALNT6Q8NCL4 622 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 TRIM58Q8NG06 486 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 ADAMTS19Q8TE59 1207 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 WNT8BQ93098 351 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 ARHGEF26Q96DR7 871 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 SCLT1Q96NL6 688 aa7.9□□□□□ -1.14
SPG11-204ENST00000557866 NOX5Q96PH1 765 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms