RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SOX9P48436 509 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 TUFMP49411 452 aaKnown RBP17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ACOT2P49753 483 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 SATB1Q01826 763 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 TMEM132DQ14C87 1099 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ZC2HC1CQ53FD0 456 aaPredicted RBP17.27■□□□□ 0.36
SCFD1-224ENST00000557713 WDR44Q5JSH3 913 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 C1orf228Q6PIY5 440 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 SPEM1Q8N4L4 309 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 CELF5Q8N6W0 485 aaKnown RBP17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ZCWPW1Q9H0M4 648 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ST6GALNAC4Q9H4F1 302 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ZHX3Q9H4I2 956 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 OBP2AQ9NY56 170 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 MYBPHLA2RUH7 354 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 SLC38A8A6NNN8 435 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 PRR5-ARHGAP8B1AHC4 643 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 TISP43B9A030 160 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 BMP15O95972 392 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 GABRR2P28476 465 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 DDIT3P35638 169 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 KPNA1P52294 538 aaPredicted RBP17.26■□□□□ 0.35
SCFD1-224ENST00000557713 ATXN1P54253 815 aaKnown RBP17.26■□□□□ 0.35
SCFD1-224ENST00000557713 ARHGAP8P85298 464 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 SLC39A12Q504Y0 691 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 ARHGAP29Q52LW3 1261 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 GPR158Q5T848 1215 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 LARP1BQ659C4 914 aaKnown RBP17.26■□□□□ 0.35
SCFD1-224ENST00000557713 ADALQ6DHV7 355 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
SCFD1-224ENST00000557713 IL21Q9HBE4 155 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 PARD6AQ9NPB6 346 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 DSEQ9UL01 958 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 C2CD2Q9Y426 696 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 F5P12259 2224 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 CEP250Q9BV73 2442 aa17.26■□□□□ 0.35
SCFD1-224ENST00000557713 SPECC1L-ADORA2AF8WAN1 911 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 DPYSL4O14531 572 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 CYB561D2O14569 222 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 PAPSS2O95340 614 aaPredicted RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 ATF6P18850 670 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 POU5F1Q01860 360 aaKnown RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 LMNB2Q03252 620 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 LRRC32Q14392 662 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 SF3A1Q15459 793 aaKnown RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 ARHGAP15Q53QZ3 475 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 DGKKQ5KSL6 1271 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 SLFN12LQ6IEE8 588 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 TXNDC11Q6PKC3 985 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 CRELD2Q6UXH1 353 aaPredicted RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 ZNF720Q7Z2F6 126 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 LRRTM3Q86VH5 581 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 RALGPS2Q86X27 583 aaPredicted RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 ZFYVE19Q96K21 471 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 LPIN3Q9BQK8 851 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 CCSER1Q9C0I3 900 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 IKZF4Q9H2S9 585 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 TASP1Q9H6P5 420 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 RBM12Q9NTZ6 932 aaKnown RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 DPP3Q9NY33 737 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 GTSE1Q9NYZ3 720 aa17.25■□□□□ 0.35
SCFD1-224ENST00000557713 AGO2Q9UKV8 859 aaKnown RBP17.25■□□□□ 0.35
SCFD1-224ENST00000557713 TSC2P49815 1807 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 K7ESF4 209 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 PRAMEF12O95522 483 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 CTHP32929 405 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 MCM2P49736 904 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 TAF6P49848 677 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 DMWDQ09019 674 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 LAIR1Q6GTX8 287 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 METTL23Q86XA0 190 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 THEM5Q8N1Q8 247 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 RASSF8Q8NHQ8 419 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 TTC8Q8TAM2 541 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 C2orf15Q8WU43 125 aaKnown RBP17.24■□□□□ 0.35
SCFD1-224ENST00000557713 SEPT5Q99719 369 aaPredicted RBP17.24■□□□□ 0.35
SCFD1-224ENST00000557713 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 SLC46A2Q9BY10 475 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 GMEB2Q9UKD1 530 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 RAB23Q9ULC3 237 aa17.24■□□□□ 0.35
SCFD1-224ENST00000557713 CHURC1-FNTBB4DL54 471 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 HRO43593 1189 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 HAPLN1P10915 354 aaPredicted RBP17.23■□□□□ 0.35
SCFD1-224ENST00000557713 ADSSP30520 456 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 FNTBP49356 437 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 CDR1P51861 262 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 CYP4F8P98187 520 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 SMARCB1Q12824 385 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 LPAL2Q16609 132 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 MGAT5BQ3V5L5 792 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 WSCD1Q658N2 575 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 Q6ZS52 159 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 USP49Q70CQ1 688 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 EFCAB13Q8IY85 973 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 BPIFB1Q8TDL5 484 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms