RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZNF124Q15973 351 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 VMACQ2NL98 169 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SLC44A4Q53GD3 710 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 FAM83BQ5T0W9 1011 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 BEND5Q7L4P6 421 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TMEM132CQ8N3T6 1108 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 LNX2Q8N448 690 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 D2HGDHQ8N465 521 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SYT8Q8NBV8 401 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 GIMAP8Q8ND71 665 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 FEZF2Q8TBJ5 459 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 IPCEF1Q8WWN9 437 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TFAP2CQ92754 450 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SNX22Q96L94 193 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 FAM227BQ96M60 508 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 CCDC138Q96M89 665 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 NEU1Q99519 415 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TINAGL1Q9GZM7 467 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 AGO4Q9HCK5 861 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 PLCB1Q9NQ66 1216 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 STK32BQ9NY57 414 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF69Q9UC07 566 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TAGLN3Q9UI15 199 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 GJD2Q9UKL4 321 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 HDAC5Q9UQL6 1122 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 COL15A1P39059 1388 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TCRBV7S2A1N4TA0A589 114 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PYCARD-AS1I3L0S3 204 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 DHHO43323 396 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 GNAI2P04899 355 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 BTF3P20290 206 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PRIM2P49643 509 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 SCNN1GP51170 649 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 NEK3P51956 506 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 SLC35G1Q2M3R5 365 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 LMBRD2Q68DH5 695 aaPredicted RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TLDC1Q6P9B6 456 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ENAHQ8N8S7 591 aaPredicted RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 RSPRY1Q96DX4 576 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TNIP3Q96KP6 325 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ISCA1Q9BUE6 129 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TTLL2Q9BWV7 592 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 FPGT-TNNI3KV9GXZ4 949 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 COL4A3Q01955 1670 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 LOC102724159A0A0B4J2E5 919 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 CCDC195A0A1B0GUA6 201 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 GXYLT2A0PJZ3 443 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 WDR27A2RRH5 827 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 RHPN2P1A8MT19 583 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 THAP12O43422 761 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 GLP2RO95838 553 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 FGAP02671 866 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 IFIT2P09913 472 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 RAP2AP10114 183 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 FGFR2P21802 821 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PWP2Q15269 919 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 LLGL1Q15334 1064 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 INSCQ1MX18 579 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 BEAN1Q3B7T3 259 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TRIM60Q495X7 471 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 SPATS1Q496A3 300 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 RABL3Q5HYI8 236 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 UBXN11Q5T124 520 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 MZT2AQ6P582 158 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 RINLQ6ZS11 566 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 KIAA0408Q6ZU52 694 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 DTX2Q86UW9 622 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ARHGEF19Q8IW93 802 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 CFAP52Q8N1V2 620 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TMIEQ8NEW7 156 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 HERPUD2Q9BSE4 406 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 CHST8Q9H2A9 424 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 GSTO2Q9H4Y5 243 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 LDAHQ9H6V9 325 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PRDM16Q9HAZ2 1276 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PNPLA8Q9NP80 782 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 VSX1Q9NZR4 365 aaPredicted RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 XPR1Q9UBH6 696 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 OGDHLQ9ULD0 1010 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TMX2Q9Y320 296 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PCDHA1Q9Y5I3 950 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 AQP7P3A6NL99 342 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 RNASET2O00584 256 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 DCLK1O15075 740 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PRICKLE3O43900 615 aaPredicted RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TBC1D4O60343 1298 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 LDHAP00338 332 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 MT-ND5P03915 603 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 HDCP19113 662 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ACO1P21399 889 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 GRK6P43250 576 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 SLC11A2P49281 568 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 TIAL1Q01085 375 aaKnown RBP eCLIP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 SCAPQ12770 1279 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 CYP2A13Q16696 494 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 MIIPQ5JXC2 388 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ERAP2Q6P179 960 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 MTHFD1LQ6UB35 978 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 YAF2Q8IY57 180 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 AMER2Q8N7J2 671 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms