RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 TAF12Q16514 161 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 BMP2KLQ5H9B9 411 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 USP37Q86T82 979 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 TMEM130Q8N3G9 435 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 TTC9BQ8N6N2 239 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 PIGKQ92643 395 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 ZMAT2Q96NC0 199 aaKnown RBP8.8□□□□□ -1
PCNX1-215ENST00000557428 ACAP3Q96P50 834 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 NACC1Q96RE7 527 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 SEPT5Q99719 369 aaPredicted RBP8.8□□□□□ -1
PCNX1-215ENST00000557428 LPIN3Q9BQK8 851 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 TCHPQ9BT92 498 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 AGXT2Q9BYV1 514 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 EBF3Q9H4W6 596 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 SLC32A1Q9H598 525 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 BRMS1Q9HCU9 246 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 GKN1Q9NS71 199 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 TUBGCP4Q9UGJ1 667 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 KLK13Q9UKR3 277 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
PCNX1-215ENST00000557428 ITPR1Q14643 2758 aa8.8□□□□□ -1
PCNX1-215ENST00000557428 SPAARA0A1B0GVQ0 90 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 EIF4E1BA6NMX2 242 aaKnown RBP8.79□□□□□ -1
PCNX1-215ENST00000557428 K7ERI5 159 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 TAF4O00268 1085 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 MED24O75448 989 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 CDKL5O76039 1030 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 ARSAP15289 507 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 RPL9P32969 192 aaKnown RBP8.79□□□□□ -1
PCNX1-215ENST00000557428 HSPA4P34932 840 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 MATR3P43243 847 aaKnown RBP eCLIP8.79□□□□□ -11e-7■■□□□ 12.3
PCNX1-215ENST00000557428 EFNA5P52803 228 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 SPAG1Q07617 926 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 BFSP1Q12934 665 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 RUNX3Q13761 415 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 DMC1Q14565 340 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 VEPH1Q14D04 833 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 SEZ6Q53EL9 994 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 TMEM196Q5HYL7 178 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 DSTYKQ6XUX3 929 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 GAREM2Q75VX8 874 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 ARMCX6Q7L4S7 300 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 DNAJB7Q7Z6W7 309 aaPredicted RBP8.79□□□□□ -1
PCNX1-215ENST00000557428 ITIH5Q86UX2 942 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 ABCA7Q8IZY2 2146 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 FAM177A1Q8N128 213 aaPredicted RBP8.79□□□□□ -1
PCNX1-215ENST00000557428 CAMKK1Q8N5S9 505 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 TSTD1Q8NFU3 115 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 POLR3CQ9BUI4 534 aaPredicted RBP8.79□□□□□ -1
PCNX1-215ENST00000557428 LRRC3Q9BY71 257 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 OBP2AQ9NY56 170 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 ANKFY1Q9P2R3 1169 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 TPCN1Q9ULQ1 816 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 MAFFQ9ULX9 164 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 WASF3Q9UPY6 502 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 NEUROG3Q9Y4Z2 214 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 TCHHQ07283 1943 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 DENND4CQ5VZ89 1909 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 TSC2P49815 1807 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 OBSL1O75147 1896 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 PHLPP2Q6ZVD8 1323 aa8.79□□□□□ -1
PCNX1-215ENST00000557428 ATXN2Q99700 1313 aaKnown RBP8.79□□□□□ -1
PCNX1-215ENST00000557428 MTMR11A4FU01 709 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 VNN2O95498 520 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 FGF19O95750 216 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 CYP11B2P19099 503 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 CSRP1P21291 193 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 BCKDHBP21953 392 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 SEC13P55735 322 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 SIM1P81133 766 aaPredicted RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 MGAT5BQ3V5L5 792 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 USP39Q53GS9 565 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 NAIF1Q69YI7 327 aaPredicted RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 CC2D1AQ6P1N0 951 aaPredicted RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 RUFY3Q7L099 469 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 CATSPER3Q86XQ3 398 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 FBXL16Q8N461 479 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 ATAD1Q8NBU5 361 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 GIPC2Q8TF65 315 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 PSMG2Q969U7 264 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 ACDQ96AP0 544 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 CHFRQ96EP1 664 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 ACO2Q99798 780 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 TARS2Q9BW92 718 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 NUSAP1Q9BXS6 441 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 MRPL4Q9BYD3 311 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 TASP1Q9H6P5 420 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 TUFT1Q9NNX1 390 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 HPS4Q9NQG7 708 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 TNFSF13BQ9Y275 285 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 CYP46A1Q9Y6A2 500 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 MYH11P35749 1972 aa8.78□□□□□ -1
PCNX1-215ENST00000557428 ASCC3Q8N3C0 2202 aaKnown RBP8.78□□□□□ -1
PCNX1-215ENST00000557428 SETXQ7Z333 2677 aaKnown RBP8.77□□□□□ -1
PCNX1-215ENST00000557428 OR6C75A6NL08 312 aa8.77□□□□□ -1.01
PCNX1-215ENST00000557428 WNT7AO00755 349 aa8.77□□□□□ -1.01
PCNX1-215ENST00000557428 CDX4O14627 284 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-215ENST00000557428 SPATA31C1P0DKV0 1188 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms