RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 IL18RAPO95256 599 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 ID4P47928 161 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 MLLT6P55198 1093 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-213ENST00000557262 SLC39A12Q504Y0 691 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 MAMSTRQ6ZN01 415 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 GAREM2Q75VX8 874 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 ARID3BQ8IVW6 561 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-213ENST00000557262 YAF2Q8IY57 180 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 ZNF687Q8N1G0 1237 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 TTC9BQ8N6N2 239 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 RUBCNQ92622 972 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
TUBB3-213ENST00000557262 PYM1Q9BRP8 204 aaKnown RBP17.17■□□□□ 0.34
TUBB3-213ENST00000557262 ATXN3LQ9H3M9 355 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 TBC1D7Q9P0N9 293 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 PCDHGA2Q9Y5H1 932 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 DCHS1Q96JQ0 3298 aa17.17■□□□□ 0.34
TUBB3-213ENST00000557262 KPNA7A9QM74 516 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 CHADO15335 359 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 SOAT2O75908 522 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 LDHAP00338 332 aaKnown RBP17.16■□□□□ 0.34
TUBB3-213ENST00000557262 KCNA1Q09470 495 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 SMARCB1Q12824 385 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
TUBB3-213ENST00000557262 WSCD1Q658N2 575 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 EFCAB13Q8IY85 973 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 ZBTB44Q8NCP5 570 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 CSGALNACT1Q8TDX6 532 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 NELL1Q92832 810 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 LMAN1LQ9HAT1 526 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 ZSCAN32Q9NX65 697 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 PIAS3Q9Y6X2 628 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-213ENST00000557262 FANCMQ8IYD8 2048 aa17.16■□□□□ 0.34
TUBB3-213ENST00000557262 ZNF292O60281 2723 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 ARNTLO00327 626 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 DPYSL4O14531 572 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 GCNT3O95395 438 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 IDEP14735 1019 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 GABRR2P28476 465 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 MTAPQ13126 283 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 VEPH1Q14D04 833 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 MGAT5BQ3V5L5 792 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 SV2CQ496J9 727 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 ARHGAP15Q53QZ3 475 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 STXBP5Q5T5C0 1151 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 LRRTM3Q86VH5 581 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 GPIHBP1Q8IV16 184 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 KIAA2013Q8IYS2 634 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 SYCP3Q8IZU3 236 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 C2orf15Q8WU43 125 aaKnown RBP17.15■□□□□ 0.34
TUBB3-213ENST00000557262 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
TUBB3-213ENST00000557262 RSPRY1Q96DX4 576 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 SEPT5Q99719 369 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-213ENST00000557262 HINFPQ9BQA5 517 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 FAM213AQ9BRX8 229 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 IER2Q9BTL4 223 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 MKNK1Q9BUB5 465 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 CHRDQ9H2X0 955 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 ZSCAN16Q9H4T2 348 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-213ENST00000557262 OLFML3Q9NRN5 406 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 NCANO14594 1321 aa17.15■□□□□ 0.34
TUBB3-213ENST00000557262 LILRB5O75023 590 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 GARTP22102 1010 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 CCNE1P24864 410 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 WEE1P30291 646 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 PNPLA4P41247 253 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 STAT6P42226 847 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 ALCAMQ13740 583 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 TAF12Q16514 161 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 GPR158Q5T848 1215 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 TSSK4Q6SA08 328 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 ERMP1Q7Z2K6 904 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 DCP1BQ8IZD4 617 aaKnown RBP17.14■□□□□ 0.33
TUBB3-213ENST00000557262 DCLK2Q8N568 766 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 SPPL2BQ8TCT7 592 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 ZNF560Q96MR9 790 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 USP28Q96RU2 1077 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 LPIN3Q9BQK8 851 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 FAM126AQ9BYI3 521 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-213ENST00000557262 TASP1Q9H6P5 420 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 C8orf33Q9H7E9 229 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-213ENST00000557262 PRMT8Q9NR22 394 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-213ENST00000557262 PANK4Q9NVE7 773 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 OBP2AQ9NY56 170 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 DMXL1Q9Y485 3027 aa17.14■□□□□ 0.33
TUBB3-213ENST00000557262 F5P12259 2224 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 SCN1AP35498 2009 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 TULP1O00294 542 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-213ENST00000557262 HAPLN1P10915 354 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-213ENST00000557262 ATF6P18850 670 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 CDR1P51861 262 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms