RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 OVOS2A0A0G2JMS6 1433 aa3.16□□□□□ -1.9
SLIRP-208ENST00000556956 ZNF536O15090 1300 aa3.16□□□□□ -1.9
SLIRP-208ENST00000556956 FMN2Q9NZ56 1722 aa3.16□□□□□ -1.9
SLIRP-208ENST00000556956 MRC1P22897 1456 aa3.16□□□□□ -1.9
SLIRP-208ENST00000556956 SLIT1O75093 1534 aa3.15□□□□□ -1.9
SLIRP-208ENST00000556956 CHD2O14647 1828 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SETD1BQ9UPS6 1966 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CCDC163A0A0D9SF12 145 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ERICH2A1L162 156 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 GOLGA6L10A6NI86 522 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 TRIM75PA6NK02 468 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 KCNJ18B7U540 433 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 EYA2O00167 538 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 IFIT3O14879 490 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 DEXIO95424 95 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 LRG1P02750 347 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 MMP1P03956 469 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SOD2P04179 222 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ATP1A1P05023 1023 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ENO2P09104 434 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SNRPA1P09661 255 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PARP1P09874 1014 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 GHRP10912 638 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 MYL6BP14649 208 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 IDEP14735 1019 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 IFNAR1P17181 557 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 EEF1GP26641 437 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 MDH1P40925 334 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PPP1R2P41236 205 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 DNM2P50570 870 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 MRPL12P52815 198 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 RCAN1P53805 252 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 NAP1L1P55209 391 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SLC8A3P57103 927 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ANTXR2P58335 489 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 HAND2P61296 217 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 TIMM10P62072 90 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SUMO1P63165 101 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 GABREP78334 506 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZBED6P86452 979 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CDK17Q00537 523 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 C2orf54Q08AI8 447 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PAK1Q13153 545 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 KCNJ12Q14500 433 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SLMAPQ14BN4 828 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 R3HDM1Q15032 1099 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PPP2R5BQ15173 497 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ALX1Q15699 326 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZKSCAN8Q15776 578 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 MEA1Q16626 185 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PTGISQ16647 500 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CCDC40Q4G0X9 1142 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 HSP90AB3PQ58FF7 597 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SPECC1Q5M775 1068 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CEP85LQ5SZL2 805 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CCDC181Q5TID7 509 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZNF658Q5TYW1 1059 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZNF585AQ6P3V2 769 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 KCNV1Q6PIU1 500 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 LMBR1LQ6UX01 489 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 LRIG3Q6UXM1 1119 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 DPP8Q6V1X1 898 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ATG9AQ7Z3C6 839 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ARMC9Q7Z3E5 817 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SGMS1Q86VZ5 419 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 NLRP14Q86W24 1093 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 IQCA1Q86XH1 822 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 FAM114A1Q8IWE2 563 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 DIS3L2Q8IYB7 885 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 TEX11Q8IYF3 940 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 EIF1ADQ8N9N8 165 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZBTB38Q8NAP3 1195 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 TRIM58Q8NG06 486 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PLBD2Q8NHP8 589 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 PIP4K2CQ8TBX8 421 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CCHCR1Q8TD31 782 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 IGDCC4Q8TDY8 1250 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZNF473Q8WTR7 871 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 NELFBQ8WX92 580 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 RIN2Q8WYP3 895 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 N4BP2L2Q92802 583 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ZKSCAN4Q969J2 545 aaPredicted RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CCDC47Q96A33 483 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 RSRC1Q96IZ7 334 aaKnown RBP3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CAPZA3Q96KX2 299 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ALS2CR12Q96Q35 445 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 DNAJC7Q99615 494 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 KCNJ15Q99712 375 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 KRT23Q9C075 422 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CSRNP2Q9H175 543 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 VPS16Q9H269 839 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CENPHQ9H3R5 247 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SLC40A1Q9NP59 571 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 JADE2Q9NQC1 790 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 ARHGEF4Q9NR80 690 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 GJB4Q9NTQ9 266 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 TAB2Q9NYJ8 693 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 CROTQ9UKG9 612 aa3.15□□□□□ -1.91
SLIRP-208ENST00000556956 SNX12Q9UMY4 172 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms