RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PNPLA4P41247 253 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 STK4Q13043 487 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 DUSP4Q13115 394 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
SHMT2-224ENST00000556737 KMT5BQ4FZB7 885 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 CENPPQ6IPU0 288 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 PDCL2Q8N4E4 241 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 ATAD1Q8NBU5 361 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
SHMT2-224ENST00000556737 KXD1Q9BQD3 176 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 INTS13Q9NVM9 706 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 DSEQ9UL01 958 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 AGAP1Q9UPQ3 857 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
SHMT2-224ENST00000556737 MYO15AQ9UKN7 3530 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 NCANO14594 1321 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 PTPRDP23468 1912 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 ZNF233A6NK53 670 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CLIC2O15247 247 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SOAT2O75908 522 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 MICAL2O94851 1124 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 MYL1P05976 194 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CFHP08603 1231 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 ATF6P18850 670 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 AVPR2P30518 371 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SYKP43405 635 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CYP2J2P51589 502 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CYP24A1Q07973 514 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 TCF15Q12870 199 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 BFSP1Q12934 665 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 PSMD6Q15008 389 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 NFKBIBQ15653 356 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 KNOP1Q1ED39 458 aaKnown RBP11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SLC39A12Q504Y0 691 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 MTSS1LQ765P7 747 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 PDZD4Q76G19 769 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-224ENST00000556737 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 OSTM1Q86WC4 334 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 WDR49Q8IV35 697 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SIX5Q8N196 739 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 PLEKHO2Q8TD55 490 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 GPR152Q8TDT2 470 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
SHMT2-224ENST00000556737 FAM122AQ96E09 287 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-224ENST00000556737 KCTD10Q9H3F6 313 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 KIAA1586Q9HCI6 787 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 ZNF334Q9HCZ1 680 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-224ENST00000556737 EXOC1Q9NV70 894 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 GDE1Q9NZC3 331 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 HSFX1Q9UBD0 423 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 WNT16Q9UBV4 365 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 SLC27A5Q9Y2P5 690 aa11.12□□□□□ -0.63
SHMT2-224ENST00000556737 HCRTO43612 131 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 ECI2O75521 394 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 CDR1P51861 262 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 NHLH1Q02575 133 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 DPYDQ12882 1025 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 PLD1Q13393 1074 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 SURF1Q15526 300 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-224ENST00000556737 HS2ST1Q7LGA3 356 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 METTL23Q86XA0 190 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 CSGALNACT2Q8N6G5 542 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 TMEM174Q8WUU8 243 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 MCRS1Q96EZ8 462 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 ANKRD36BP1Q96IX9 119 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 ASAH2Q9NR71 780 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 CGNQ9P2M7 1197 aaKnown RBP11.11□□□□□ -0.63
SHMT2-224ENST00000556737 FBXL21Q9UKT6 434 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 DENND4CQ5VZ89 1909 aa11.11□□□□□ -0.63
SHMT2-224ENST00000556737 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 TICRRQ7Z2Z1 1910 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 GABRDO14764 452 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 RHOBTB3O94955 611 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 TNNC2P02585 160 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 RPN1P04843 607 aaKnown RBP11.1□□□□□ -0.63
SHMT2-224ENST00000556737 KRT19P08727 400 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 MYL4P12829 197 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 GJA1P17302 382 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 AOC1P19801 751 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 PTMSP20962 102 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 CLCN5P51795 746 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms