RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CFIP05156 583 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 SETSIPP0DME0 302 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 MGAT1P26572 445 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 MAP2K6P52564 334 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 SIM1P81133 766 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-210ENST00000556718 ZNF169Q14929 603 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-210ENST00000556718 MAEAQ7L5Y9 396 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 SRRM1Q8IYB3 904 aaKnown RBP5.3□□□□□ -1.56
PRPF39-210ENST00000556718 FAM9AQ8IZU1 332 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-210ENST00000556718 KRT78Q8N1N4 520 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 SLC35B2Q8TB61 432 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 ZNF384Q8TF68 577 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 PHACTR3Q96KR7 559 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 Q96MF0 132 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 LRRC27Q9C0I9 530 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 KIAA1586Q9HCI6 787 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 PCDHA13Q9Y5I0 950 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 NR2E3Q9Y5X4 410 aa5.3□□□□□ -1.56
PRPF39-210ENST00000556718 LRRC3CA6NJW4 275 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 FOXN3O00409 490 aaPredicted RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 TCEA3O75764 348 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 SLC5A1P13866 664 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 RPL17P18621 184 aaKnown RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 CTSSP25774 331 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 SMARCA1P28370 1054 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 ADSLP30566 484 aaPredicted RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 CDC42EP1Q00587 391 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 CHAF1AQ13111 956 aaPredicted RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 STK3Q13188 491 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 NOGQ13253 232 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 AGAP9Q5VTM2 703 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 GADL1Q6ZQY3 521 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 MYLK4Q86YV6 388 aaPredicted RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 OR56A1Q8NGH5 318 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 NSUN6Q8TEA1 469 aaKnown RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 PPM1EQ8WY54 764 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 SLC9A6Q92581 669 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 CYFIP2Q96F07 1278 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 CLPTM1LQ96KA5 538 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 UHRF1Q96T88 793 aaPredicted RBP5.29□□□□□ -1.56
PRPF39-210ENST00000556718 PPCSQ9HAB8 311 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 CNNM1Q9NRU3 951 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 LMBRD1Q9NUN5 540 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 GPRC5DQ9NZD1 345 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 SNX13Q9Y5W8 968 aa5.29□□□□□ -1.56
PRPF39-210ENST00000556718 A0A088AWK7 358 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 A0A1W2PPL8 197 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 RHPN2P1A8MT19 583 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 H3BUI4 141 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 PHGDHO43175 533 aaKnown RBP5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ADCY6O43306 1168 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 FDXRP22570 491 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 SERPINB3P29508 390 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ALDH5A1P51649 535 aaPredicted RBP5.28□□□□□ -1.56
PRPF39-210ENST00000556718 HK3P52790 923 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 DSC2Q02487 901 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 RAB39AQ14964 217 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 C19orf54Q5BKX5 351 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 FAM83BQ5T0W9 1011 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ANO1Q5XXA6 986 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 B3GNTL1Q67FW5 361 aaPredicted RBP5.28□□□□□ -1.56
PRPF39-210ENST00000556718 DPP9Q86TI2 863 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ZNF480Q8WV37 535 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 TBCBQ99426 244 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 APOL5Q9BWW9 433 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ARMT1Q9H993 441 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ARFGAP3Q9NP61 516 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 SEMA4GQ9NTN9 838 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 LRCH1Q9Y2L9 728 aa5.28□□□□□ -1.56
PRPF39-210ENST00000556718 ABHD14A-ACY1A0A1B0GW23 586 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 F5H423 210 aaPredicted RBP5.27□□□□□ -1.57
PRPF39-210ENST00000556718 WNT10BO00744 389 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 NPHP1O15259 732 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 FRS3O43559 492 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 TM4SF4P48230 202 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 RARRES1P49788 294 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 RAB1AP62820 205 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 NHLH1Q02575 133 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 RAPGEF1Q13905 1077 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 KRT72Q14CN4 511 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 XRRA1Q6P2D8 792 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 Q6ZNX1 250 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 MAPKAPK5Q8IW41 473 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 TMEM132CQ8N3T6 1108 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 OR2I1PQ8NGU4 316 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 ZFP28Q8NHY6 868 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 DEPTORQ8TB45 409 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 ZSWIM1Q9BR11 485 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 ALOXE3Q9BYJ1 711 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms