RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SMCR8Q8TEV9 937 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-243ENST00000556671 RUFY2Q8WXA3 655 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 ASB15Q8WXK1 588 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 CFHR4Q92496 578 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 DLG3Q92796 817 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 SCLYQ96I15 445 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 MAGEB10Q96LZ2 347 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-243ENST00000556671 KIAA1683Q9H0B3 1180 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 OR10A5Q9H207 317 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 ZNF287Q9HBT7 754 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 KCNH7Q9NS40 1196 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 ZBTB21Q9ULJ3 1066 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 AFG3L2Q9Y4W6 797 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 RPAP1Q9BWH6 1393 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-243ENST00000556671 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PLXNB2O15031 1838 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PARP14Q460N5 1801 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 MCM3APO60318 1980 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 ATRNL1Q5VV63 1379 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CCDC163A0A0D9SF12 145 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 A0A0G2JNJ9 132 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 C19orf81C9J6K1 198 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 ZNF213O14771 459 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 TSPY3P0CV98 308 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 TSPY8P0CW00 308 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 AKR1B1P15121 316 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 SDHAP31040 664 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 SHMT1P34896 483 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 IRX3P78415 501 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-243ENST00000556671 TFAP4Q01664 338 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 SP3Q02447 781 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PPARAQ07869 468 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATXN3-243ENST00000556671 ARHGEF6Q15052 776 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PCOLCEQ15113 449 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 MIIPQ5JXC2 388 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 VPS53Q5VIR6 699 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 WDR78Q5VTH9 848 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 TATDN1Q6P1N9 297 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 RNF207Q6ZRF8 634 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 OTOP2Q7RTS6 562 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CD99L2Q8TCZ2 262 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 ACER1Q8TDN7 264 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 MKL1Q969V6 931 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 OR14A2Q96R54 314 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 DNAJC7Q99615 494 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PAGR1Q9BTK6 254 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 SAGE1Q9NXZ1 904 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 ARPP21Q9UBL0 812 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CLIP2Q9UDT6 1046 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 Q9UFV3 132 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 SFMBT1Q9UHJ3 866 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 PUF60Q9UHX1 559 aaKnown RBP5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CDC42EP3Q9UKI2 254 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 ASB1Q9Y576 335 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-243ENST00000556671 B3GALT1Q9Y5Z6 326 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 THSD7BQ9C0I4 1608 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 CCDC171Q6TFL3 1326 aa5.48□□□□□ -1.53
ATXN3-243ENST00000556671 LOC285556D6RIA3 1793 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 TSPY2A6NKD2 308 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 FOXP2O15409 715 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 FGAP02671 866 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ACO1P21399 889 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 RPS19P39019 145 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 HMGA2P52926 109 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 BACE1P56817 501 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 FOXE3Q13461 319 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 MOGSQ13724 837 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 PLS1Q14651 629 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 SBK1Q52WX2 424 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 GIMAP6Q6P9H5 292 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 CASC1Q6TDU7 716 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 MAMDC4Q6UXC1 1216 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 MFSD6Q6ZSS7 791 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 TMEM179Q6ZVK1 233 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 C16orf86Q6ZW13 317 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 FILIP1Q7Z7B0 1213 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ANKRD23Q86SG2 305 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ANKRD13CQ8N6S4 541 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ZSWIM2Q8NEG5 633 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 WDR48Q8TAF3 677 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ZNF503Q96F45 646 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 ERO1AQ96HE7 468 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 GBP4Q96PP9 640 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 SRPK1Q96SB4 655 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 P2RX7Q99572 595 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 MRPL4Q9BYD3 311 aaKnown RBP5.47□□□□□ -1.53
ATXN3-243ENST00000556671 PCED1AQ9H1Q7 454 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 OR10A2Q9H208 303 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 C12orf65Q9H3J6 166 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms