RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 USP14P54578 494 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 GPSM2P81274 684 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 MAEAQ7L5Y9 396 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 CHST15Q7LFX5 561 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-221ENST00000556534 USP37Q86T82 979 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 ADGRG5Q8IZF4 528 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 PSD4Q8NDX1 1056 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 POC1BQ8TC44 478 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 DDX17Q92841 729 aaKnown RBP5.79□□□□□ -1.48
SCFD1-221ENST00000556534 C22orf23Q9BZE7 217 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 FAM204AQ9H8W3 233 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 PRDM11Q9NQV5 511 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 SYBUQ9NX95 663 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 NEU2Q9Y3R4 380 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 E7ENX8 843 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 UNC5CO95185 931 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 ITGAMP11215 1152 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 FDXRP22570 491 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 TGM1P22735 817 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 ARFIP2P53365 341 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 TAP2Q03519 686 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 FHL2Q14192 279 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 LLGL1Q15334 1064 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 ABHD17BQ5VST6 288 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 SP5Q6BEB4 398 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-221ENST00000556534 PCSK4Q6UW60 755 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 COLGALT2Q8IYK4 626 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 PCSK9Q8NBP7 692 aaKnown RBP5.78□□□□□ -1.48
SCFD1-221ENST00000556534 BEND2Q8NDZ0 799 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 IL31RAQ8NI17 732 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 SSH3Q8TE77 659 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 P2RX7Q99572 595 aaKnown RBP5.78□□□□□ -1.48
SCFD1-221ENST00000556534 PRRX2Q99811 253 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 TRIM54Q9BYV2 358 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 SIK2Q9H0K1 926 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 CNNM1Q9NRU3 951 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 HESX1Q9UBX0 185 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 SRRDQ9UH36 339 aa5.78□□□□□ -1.48
SCFD1-221ENST00000556534 TRGV11A0A075B6L2 103 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 A0A1W2PPL8 197 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 TOR1BO14657 336 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 TPP1O14773 563 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 PHGDHO43175 533 aaKnown RBP5.77□□□□□ -1.49
SCFD1-221ENST00000556534 ZBED1O96006 694 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 HRGP04196 525 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 CHRM3P20309 590 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 KCNJ5P48544 419 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 RPS7P62081 194 aaKnown RBP5.77□□□□□ -1.49
SCFD1-221ENST00000556534 BLOC1S1P78537 153 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 DYRK1AQ13627 763 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 BOP1Q14137 746 aaKnown RBP5.77□□□□□ -1.49
SCFD1-221ENST00000556534 CNN3Q15417 329 aaKnown RBP5.77□□□□□ -1.49
SCFD1-221ENST00000556534 CD300EQ496F6 205 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-221ENST00000556534 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 TAF2Q6P1X5 1199 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 APOA5Q6Q788 366 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 SRGAP1Q7Z6B7 1085 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 FAM46DQ8NEK8 389 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 KBTBD7Q8WVZ9 684 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 LINC00476Q8WZB0 136 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 C8orf48Q96LL4 319 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 DPH1Q9BZG8 443 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 SMOC2Q9H3U7 446 aa5.77□□□□□ -1.49
SCFD1-221ENST00000556534 PIH1D1Q9NWS0 290 aaKnown RBP5.77□□□□□ -1.49
SCFD1-221ENST00000556534 FRMPD2Q68DX3 1309 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-221ENST00000556534 COL4A3Q01955 1670 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 FRS3O43559 492 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 VPS4BO75351 444 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 KITP10721 976 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 PREPLQ4J6C6 727 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-221ENST00000556534 FAM160B1Q5W0V3 765 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 DGKHQ86XP1 1220 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 LNX2Q8N448 690 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 FAM156AQ8NDB6 213 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 FBXO41Q8TF61 875 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 SNX19Q92543 992 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 ANKS1AQ92625 1134 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 TIFAQ96CG3 184 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 COQ10AQ96MF6 247 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 SPATA5L1Q9BVQ7 753 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 INTS13Q9NVM9 706 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 TBCCD1Q9NVR7 557 aa5.76□□□□□ -1.49
SCFD1-221ENST00000556534 TESQ9UGI8 421 aaKnown RBP5.76□□□□□ -1.49
SCFD1-221ENST00000556534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCFD1-221ENST00000556534 TMEM191CA6NGB0 347 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 MYO1FO00160 1098 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 FOXN1O15353 648 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 GRPP07492 148 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 HKR1P10072 659 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 RHCEP18577 417 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 EN2P19622 333 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-221ENST00000556534 GATA3P23771 443 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 NPTX2P47972 431 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 RHDQ02161 417 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 DPTQ07507 201 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 HLXQ14774 488 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-221ENST00000556534 HECTD2Q5U5R9 776 aa5.75□□□□□ -1.49
SCFD1-221ENST00000556534 SLC30A10Q6XR72 485 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms