RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 KLRG2A4D1S0 409 aaPredicted RBP15.65■□□□□ 0.1
CUX1-215ENST00000556210 RARGP13631 454 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 GLRA2P23416 452 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 FSTL1Q12841 308 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 HIF1AQ16665 826 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 DHX35Q9H5Z1 703 aaKnown RBP15.65■□□□□ 0.1
CUX1-215ENST00000556210 CYP39A1Q9NYL5 469 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 KLK14Q9P0G3 267 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 DNM1LO00429 736 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 TROVE2P10155 538 aaKnown RBP eCLIP15.64■□□□□ 0.09
CUX1-215ENST00000556210 LCP1P13796 627 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 PREPLQ4J6C6 727 aaPredicted RBP15.64■□□□□ 0.09
CUX1-215ENST00000556210 DUPD1Q68J44 220 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 SPATA18Q8TC71 538 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 RAB3IPQ96QF0 476 aaPredicted RBP15.64■□□□□ 0.09
CUX1-215ENST00000556210 OSBPL7Q9BZF2 842 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 FAM129AQ9BZQ8 928 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 YIPF3Q9GZM5 350 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 RAB6BQ9NRW1 208 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 CFAP73A6NFT4 308 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 B4GALT5O43286 388 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 DSG3P32926 999 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 IREB2P48200 963 aaKnown RBP15.64■□□□□ 0.09
CUX1-215ENST00000556210 SLC10A4Q96EP9 437 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 MMP19Q99542 508 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 FHDC1Q9C0D6 1143 aaPredicted RBP15.64■□□□□ 0.09
CUX1-215ENST00000556210 CHRNB2P17787 502 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 C3orf20Q8ND61 904 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 CCHCR1Q8TD31 782 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 SMYD2Q9NRG4 433 aa15.64■□□□□ 0.09
CUX1-215ENST00000556210 ADGRA3Q8IWK6 1321 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 IGF2BP3O00425 579 aaKnown RBP eCLIP15.63■□□□□ 0.09
CUX1-215ENST00000556210 PROSCO94903 275 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 PAX7P23759 505 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 SSTR1P30872 391 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 HSD17B4P51659 736 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 TSNAXIP1Q2TAA8 658 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 ACTL9Q8TC94 416 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 AGR3Q8TD06 166 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 FERMT1Q9BQL6 677 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 KIF9Q9HAQ2 790 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 NPHS2Q9NP85 383 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 NAALADL1Q9UQQ1 740 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 DHX15O43143 795 aaKnown RBP15.63■□□□□ 0.09
CUX1-215ENST00000556210 CREB3O43889 395 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 CDH16O75309 829 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 SLC8A3P57103 927 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 APOBEC3FQ8IUX4 373 aaKnown RBP15.63■□□□□ 0.09
CUX1-215ENST00000556210 ABRAQ8N0Z2 381 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 NIF3L1Q9GZT8 377 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 SPATS2LQ9NUQ6 558 aaKnown RBP15.63■□□□□ 0.09
CUX1-215ENST00000556210 DMAC2Q9NW81 257 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 USP15Q9Y4E8 981 aaPredicted RBP15.63■□□□□ 0.09
CUX1-215ENST00000556210 MED7O43513 233 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 ANP32DO95626 131 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 ATP6V1G2O95670 118 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 GH1P01241 217 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 ARL4CP56559 192 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 PDE1BQ01064 536 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 SPARCL1Q14515 664 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 MUM1Q2TAK8 710 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 UBAP2Q5T6F2 1119 aaKnown RBP15.63■□□□□ 0.09
CUX1-215ENST00000556210 C11orf63Q6NUN7 778 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 SPATA21Q7Z572 469 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 MAP7D3Q8IWC1 876 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 GBP7Q8N8V2 638 aaPredicted RBP15.63■□□□□ 0.09
CUX1-215ENST00000556210 HELQQ8TDG4 1101 aa15.63■□□□□ 0.09
CUX1-215ENST00000556210 CFAP69A5D8W1 941 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 KCNN4O15554 427 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 UBOX5O94941 541 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 MAPTP10636 758 aaKnown RBP15.62■□□□□ 0.09
CUX1-215ENST00000556210 BCAR1P56945 870 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 OTUD4Q01804 1114 aaKnown RBP15.62■□□□□ 0.09
CUX1-215ENST00000556210 KIZQ2M2Z5 673 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 TEX2Q8IWB9 1127 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 HIPK4Q8NE63 616 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 LRRC4CQ9HCJ2 640 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 ZNF536O15090 1300 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 A0A087WZ62 844 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 I3L4J1 428 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 TOM1L1O75674 476 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 UBA1P22314 1058 aaKnown RBP15.62■□□□□ 0.09
CUX1-215ENST00000556210 SLC1A1P43005 524 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 SGSM1Q2NKQ1 1148 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 MORC4Q8TE76 937 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 ERP27Q96DN0 273 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 AGAP3Q96P47 875 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 FDXACB1Q9BRP7 624 aaPredicted RBP15.62■□□□□ 0.09
CUX1-215ENST00000556210 KDM4CQ9H3R0 1056 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.62■□□□□ 0.093e-6■□□□□ 8.8
CUX1-215ENST00000556210 C19orf81C9J6K1 198 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 BAG2O95816 211 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 ZNF286BP0CG31 522 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 GARTP22102 1010 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 CDC25CP30307 473 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 LAMTOR4Q0VGL1 99 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 HSDL1Q3SXM5 330 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 TMEM130Q8N3G9 435 aa15.62■□□□□ 0.09
CUX1-215ENST00000556210 TMC2Q8TDI7 906 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms