RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZDHHC17Q8IUH5 632 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 DDIASQ8IXT1 998 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 SLC44A5Q8NCS7 719 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 DNERQ8NFT8 737 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 DACH2Q96NX9 599 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 REEP2Q9BRK0 252 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 ETNK1Q9HBU6 452 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 NDUFA13Q9P0J0 144 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 RASA1P20936 1047 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 PDCLQ13371 301 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 DCAF6Q58WW2 860 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 POP5Q969H6 163 aaKnown RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 SERPINB12Q96P63 405 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 SH3GL1Q99961 368 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 PRRG3Q9BZD7 231 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 FBXL5Q9UKA1 691 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 RAD54BQ9Y620 910 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 NBPF26B4DH59 902 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 DFFAO00273 331 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 PRRG1O14668 218 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 MOCS2O96007 188 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 GGCXP38435 758 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 TGM3Q08188 693 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 NCAPHQ15003 741 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 LCA5Q86VQ0 697 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 NBPF15Q8N660 670 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 ZNF512Q96ME7 567 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 MAF1Q9H063 256 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 LHX1P48742 406 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 HPCAP84074 193 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 NR1I3Q14994 352 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 ARL8AQ96BM9 186 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 SARS2Q9NP81 518 aaKnown RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 NEU2Q9Y3R4 380 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 MAGEB16A2A368 324 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 NTSR2O95665 410 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 IFNA14P01570 189 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 TRIM49P0CI25 452 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 TRIM49CP0CI26 452 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 AXLP30530 894 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 RXRGP48443 463 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 PCBP1Q15365 356 aaKnown RBP eCLIP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 BEND6Q5SZJ8 279 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 BTNL9Q6UXG8 535 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 ZC3H18Q86VM9 953 aaKnown RBP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.2□□□□□ -0.62
ACTN1-216ENST00000556083 TEX9Q8N6V9 391 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 GMCL1P1Q8NEA9 526 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 AP3M1Q9Y2T2 418 aa11.2□□□□□ -0.62
ACTN1-216ENST00000556083 C17orf102A2RUQ5 167 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 PI4K2BG5E9Z4 385 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 DYRK3O43781 588 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 ADCY1Q08828 1119 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 USP10Q14694 798 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 POLD3Q15054 466 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 AGAP9Q5VTM2 703 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 PTRHD1Q6GMV3 140 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 SZRD1Q7Z422 152 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 RIN3Q8TB24 985 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 SLC35G2Q8TBE7 412 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 HNRNPLLQ8WVV9 542 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 UBXN6Q9BZV1 441 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 TMX2Q9Y320 296 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 SPDYE5A6NIY4 337 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 C2orf81A6NN90 581 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 TBC1D4O60343 1298 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 SRP72O76094 671 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 MDH1P40925 334 aaKnown RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 RENBPP51606 427 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 KCNA1Q09470 495 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 SPDYE7PQ495Y7 208 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 ZNF544Q6NX49 715 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 RSPH1Q8WYR4 309 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 TBCBQ99426 244 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 ISCUQ9H1K1 167 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 EPN3Q9H201 632 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 USP15Q9Y4E8 981 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 PRPF4O43172 522 aaKnown RBP eCLIP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 LCP1P13796 627 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 AKT1P31749 480 aa11.19□□□□□ -0.62
ACTN1-216ENST00000556083 GNL1P36915 607 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-216ENST00000556083 SF3A3Q12874 501 aaKnown RBP eCLIP11.19□□□□□ -0.624e-7■■■■■ 37.1
ACTN1-216ENST00000556083 WLSQ5T9L3 541 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms