RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	SIK3	Q9Y2K2	1263 aa		6	□□□□□ -1.45
ATL1-208	ENST00000556067	BZW2	Q9Y6E2	419 aa	Known RBP	6	□□□□□ -1.45
ATL1-208	ENST00000556067	MYH9	P35579	1960 aa	Known RBP	6	□□□□□ -1.45
ATL1-208	ENST00000556067	MBLAC1	A4D2B0	266 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	KIF2A	O00139	706 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	EREG	O14944	169 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	PMM2	O15305	246 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	TREH	O43280	583 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	NDUFB5	O43674	189 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	AKR1B10	O60218	316 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ZNF500	O60304	480 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	TNFRSF21	O75509	655 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	IL18RAP	O95256	599 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	IGHA1	P01876	353 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ASGR1	P07306	291 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CLTA	P09496	248 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	FER	P16591	822 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	HSPA6	P17066	643 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	SLC9A1	P19634	815 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	PON1	P27169	355 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CST5	P28325	142 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ADSS	P30520	456 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	AXL	P30530	894 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	STAT1	P42224	750 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	GCLM	P48507	274 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ACOT2	P49753	483 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	KLK7	P49862	253 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ACLY	P53396	1101 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CRYBB1	P53674	252 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	MFAP3	P55082	362 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	NKX3-2	P78367	333 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CCZ1B	P86790	482 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CCZ1	P86791	482 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	POU5F1	Q01860	360 aa	Known RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	MBTD1	Q05BQ5	628 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	MCL1	Q07820	350 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	GOLGA8F	Q08AF8	430 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	GOLGA8DP	Q0D2H9	430 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	TMEM62	Q0P6H9	643 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	TRPC3	Q13507	836 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	DUOXA2	Q1HG44	320 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	KIZ	Q2M2Z5	673 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	DCAF4L1	Q3SXM0	396 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	TDRD12	Q587J7	1177 aa	Known RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	MARCH8	Q5T0T0	291 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	KLHDC7A	Q5VTJ3	777 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	NOTUM	Q6P988	496 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	PDXDC1	Q6P996	788 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	SHISA2	Q6UWI4	295 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	XKR5	Q6UX68	686 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CD302	Q8IX05	232 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	THNSL1	Q8IYQ7	743 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CCDC170	Q8IYT3	715 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	LINC01465	Q8N7H1	131 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	FBXL13	Q8NEE6	735 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	PARD3B	Q8TEW8	1205 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	DNAJB3	Q8WWF6	145 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	TTC9	Q92623	222 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	SYN2	Q92777	582 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	BORCS6	Q96GS4	357 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ANKRD36BP1	Q96IX9	119 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	ZNF668	Q96K58	619 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	FBXL18	Q96ME1	805 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	NT5C1B	Q96P26	610 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	DNAJC7	Q99615	494 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CCDC94	Q9BW85	323 aa	Predicted RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	INTS2	Q9H0H0	1204 aa	Known RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CCDC113	Q9H0I3	377 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	RPF1	Q9H9Y2	349 aa	Known RBP	5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	NLRC4	Q9NPP4	1024 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	C1orf112	Q9NSG2	853 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	GTF2IRD1	Q9UHL9	959 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	FBXL5	Q9UKA1	691 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	PYCARD	Q9ULZ3	195 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	CNTNAP2	Q9UHC6	1331 aa		5.99	□□□□□ -1.45
ATL1-208	ENST00000556067	DOCK5	Q9H7D0	1870 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	MYADML2	A6NDP7	307 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	LRRC53	A6NM62	1247 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	LRRIQ3	A6PVS8	624 aa	Predicted RBP	5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	ADAMTS4	O75173	837 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	KIF4A	O95239	1232 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	SERPING1	P05155	500 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	ADRB2	P07550	413 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	GJB1	P08034	283 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	TMEM191B	P0C7N4	346 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	STAG3L1	P0CL83	205 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	DARS	P14868	501 aa	Known RBP	5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	UCHL3	P15374	230 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	ZSCAN20	P17040	1043 aa	Predicted RBP	5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	EIF4B	P23588	611 aa	Known RBP	5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	USP8	P40818	1118 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	PIK3CA	P42336	1068 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	OSTN	P61366	133 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	DLG4	P78352	724 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	MRPS6	P82932	125 aa	Known RBP	5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	CDK17	Q00537	523 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	KLHL30	Q0D2K2	578 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	ITGA7	Q13683	1181 aa		5.98	□□□□□ -1.45
ATL1-208	ENST00000556067	PTPN14	Q15678	1187 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms