RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 NT5C1AQ9BXI3 368 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 UBE2OQ9C0C9 1292 aaKnown RBP12.81□□□□□ -0.36
APEX1-212ENST00000556054 SDCBP2Q9H190 292 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 MARCH5Q9NX47 278 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 PCDHB12Q9Y5F1 795 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
APEX1-212ENST00000556054 PDE4DIPQ5VU43 2346 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 NLRC5Q86WI3 1866 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 VWA8A3KMH1 1905 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 ITGB1P05556 798 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 RB1P06400 928 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 PCSK1P29120 753 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 GNL1P36915 607 aaPredicted RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 RAD23BP54727 409 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 CDH8P55286 799 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 STILQ15468 1287 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 FUT10Q6P4F1 479 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 TMEM139Q8IV31 216 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 RBBP8NLQ8NC74 664 aaPredicted RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 WHAMMQ8TF30 809 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 TMEM176AQ96HP8 235 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 TNIP3Q96KP6 325 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 ACBD6Q9BR61 282 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 SNX25Q9H3E2 840 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.362e-7■■■■□ 22
APEX1-212ENST00000556054 CACNG4Q9UBN1 327 aa12.8□□□□□ -0.36
APEX1-212ENST00000556054 PRG3Q9Y2Y8 225 aaPredicted RBP12.8□□□□□ -0.36
APEX1-212ENST00000556054 GBF1Q92538 1859 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 CYP26A1O43174 497 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 CLSTN1O94985 981 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 KRT5P13647 590 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 IGFBP6P24592 240 aaPredicted RBP12.79□□□□□ -0.36
APEX1-212ENST00000556054 BRCC3P46736 316 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 NDST1P52848 882 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 KLHL30Q0D2K2 578 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
APEX1-212ENST00000556054 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 E4F1Q66K89 784 aaPredicted RBP12.79□□□□□ -0.36
APEX1-212ENST00000556054 SCARA5Q6ZMJ2 495 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 DDX53Q86TM3 631 aaKnown RBP12.79□□□□□ -0.36
APEX1-212ENST00000556054 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 SLC4A11Q8NBS3 891 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 ELMO3Q96BJ8 720 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 TMEM169Q96HH4 297 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 BAG1Q99933 345 aaPredicted RBP12.79□□□□□ -0.36
APEX1-212ENST00000556054 MRPL45Q9BRJ2 306 aaKnown RBP12.79□□□□□ -0.36
APEX1-212ENST00000556054 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 CHST7Q9NS84 486 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 LZTS1Q9Y250 596 aa12.79□□□□□ -0.36
APEX1-212ENST00000556054 A8MXQ7 604 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 H7C4K7 107 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 ARHGAP6O43182 974 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 MED7O43513 233 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 SOD2P04179 222 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 VDRP11473 427 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 CYP11B1P15538 503 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 CD58P19256 250 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 BMPR1AP36894 532 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 USP8P40818 1118 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 KRT17Q04695 432 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
APEX1-212ENST00000556054 UBE3AQ05086 875 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
APEX1-212ENST00000556054 RAB30Q15771 203 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 CNGA2Q16280 664 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
APEX1-212ENST00000556054 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 PPP1R2P3Q6NXS1 205 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 OR6B3Q8NGW1 331 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 EPS8L1Q8TE68 723 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 DDX1Q92499 740 aaKnown RBP12.78□□□□□ -0.36
APEX1-212ENST00000556054 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 ELOVL4Q9GZR5 314 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 ARHGAP20Q9P2F6 1191 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 NOCTQ9UK39 431 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms