RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 A0A087X0B3 334 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 CD8B2A6NJW9 211 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 TRIAP1O43715 76 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
SRP54-207ENST00000555535 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 Q4G0T1 1027 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 MIS18BP1Q6P0N0 1132 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 GSG1LQ6UXU4 331 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 ATRIPQ8WXE1 791 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 THOC3Q96J01 351 aaKnown RBP4.34□□□□□ -1.71
SRP54-207ENST00000555535 ASB2Q96Q27 587 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 ADI1Q9BV57 179 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 TLR10Q9BXR5 811 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 MANSC1Q9H8J5 431 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 ARHGEF3Q9NR81 526 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 TOPORSQ9NS56 1045 aaPredicted RBP4.34□□□□□ -1.71
SRP54-207ENST00000555535 MDFICQ9P1T7 246 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 ICKQ9UPZ9 632 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 RUVBL1Q9Y265 456 aaKnown RBP4.34□□□□□ -1.71
SRP54-207ENST00000555535 SPATA31A3Q5VYP0 1347 aa4.34□□□□□ -1.71
SRP54-207ENST00000555535 A0A0B4J269 797 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 FAM171A2A8MVW0 826 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 BPIP17213 487 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 NPTX2P47972 431 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
SRP54-207ENST00000555535 POU6F2P78424 691 aaPredicted RBP4.33□□□□□ -1.72
SRP54-207ENST00000555535 TUBB3Q13509 450 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 GTF2H3Q13889 308 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 SHC4Q6S5L8 630 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 TMPRSS9Q7Z410 1059 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 C8orf58Q8NAV2 365 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 LEO1Q8WVC0 666 aaPredicted RBP4.33□□□□□ -1.72
SRP54-207ENST00000555535 SSH1Q8WYL5 1049 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 MFSD3Q96ES6 412 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 OSBPL9Q96SU4 736 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 HIPK2Q9H2X6 1198 aa4.33□□□□□ -1.72
SRP54-207ENST00000555535 MRPL42Q9Y6G3 142 aaKnown RBP4.33□□□□□ -1.72
SRP54-207ENST00000555535 WDR17Q8IZU2 1322 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 AGFG2O95081 481 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 TGFB3P10600 412 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 ID4P47928 161 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 ALDH9A1P49189 494 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 ATP13A4Q4VNC1 1196 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 DGKKQ5KSL6 1271 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 FOXP4Q8IVH2 680 aaPredicted RBP4.32□□□□□ -1.72
SRP54-207ENST00000555535 CLRN3Q8NCR9 226 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.32□□□□□ -1.72
SRP54-207ENST00000555535 TSPEARQ8WU66 669 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 UBXN4Q92575 508 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 DRC1Q96MC2 740 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 C5orf34Q96MH7 638 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 CAMKK2Q96RR4 588 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 FAM118BQ9BPY3 351 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 ACE2Q9BYF1 805 aaPredicted RBP4.32□□□□□ -1.72
SRP54-207ENST00000555535 TPSD1Q9BZJ3 242 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 C11orf54Q9H0W9 315 aaPredicted RBP4.32□□□□□ -1.72
SRP54-207ENST00000555535 IFT122Q9HBG6 1241 aa4.32□□□□□ -1.72
SRP54-207ENST00000555535 LY6G6EA0A0G2JKS1 128 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 NEMP1O14524 444 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 ZNF213O14771 459 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 CDC45O75419 566 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 RHOP08100 348 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 T-ENOLP0DO92 83 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 MTHFD1P11586 935 aaKnown RBP4.31□□□□□ -1.72
SRP54-207ENST00000555535 DDCP20711 480 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 CCT2P78371 535 aaKnown RBP4.31□□□□□ -1.72
SRP54-207ENST00000555535 PPP3CAQ08209 521 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 MGAT2Q10469 447 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 MUM1Q2TAK8 710 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 LVRNQ6Q4G3 990 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 WDR53Q7Z5U6 358 aaPredicted RBP4.31□□□□□ -1.72
SRP54-207ENST00000555535 KIAA0907Q7Z7F0 614 aaPredicted RBP4.31□□□□□ -1.72
SRP54-207ENST00000555535 JAZF1Q86VZ6 243 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 CMIPQ8IY22 773 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 PNLDC1Q8NA58 520 aaKnown RBP4.31□□□□□ -1.72
SRP54-207ENST00000555535 TRMOQ9BU70 441 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 PLAAQ9Y263 795 aa4.31□□□□□ -1.72
SRP54-207ENST00000555535 QSOX1O00391 747 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 SMAD6O43541 496 aaKnown RBP4.3□□□□□ -1.72
SRP54-207ENST00000555535 PDE8AO60658 829 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 MALLQ13021 153 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 FHL3Q13643 280 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 FAM9AQ8IZU1 332 aaPredicted RBP4.3□□□□□ -1.72
SRP54-207ENST00000555535 CFAP52Q8N1V2 620 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 CCHCR1Q8TD31 782 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 CUL5Q93034 780 aa4.3□□□□□ -1.72
SRP54-207ENST00000555535 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.29□□□□□ -1.72
SRP54-207ENST00000555535 MYCLP1P12525 358 aaPredicted RBP4.29□□□□□ -1.72
SRP54-207ENST00000555535 KCNJ5P48544 419 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 HTR6P50406 440 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 EEFSECP57772 596 aaKnown RBP4.29□□□□□ -1.72
SRP54-207ENST00000555535 ATP8B2P98198 1209 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
SRP54-207ENST00000555535 MC2RQ01718 297 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 TBCCQ15814 346 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 ZNF618Q5T7W0 954 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 UTP14CQ5TAP6 766 aaKnown RBP4.29□□□□□ -1.72
SRP54-207ENST00000555535 CHSY1Q86X52 802 aa4.29□□□□□ -1.72
SRP54-207ENST00000555535 PDGFCQ9NRA1 345 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms