RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SPATA20Q8TB22 786 aa13□□□□□ -0.33
SRP54-206ENST00000555317 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
SRP54-206ENST00000555317 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
SRP54-206ENST00000555317 PGLYRP2Q96PD5 576 aa13□□□□□ -0.33
SRP54-206ENST00000555317 MMS19Q96T76 1030 aa13□□□□□ -0.33
SRP54-206ENST00000555317 CD320Q9NPF0 282 aa13□□□□□ -0.33
SRP54-206ENST00000555317 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
SRP54-206ENST00000555317 INSL5Q9Y5Q6 135 aa13□□□□□ -0.33
SRP54-206ENST00000555317 DOCK6Q96HP0 2047 aa13□□□□□ -0.33
SRP54-206ENST00000555317 LRRIQ3A6PVS8 624 aaPredicted RBP12.99□□□□□ -0.33
SRP54-206ENST00000555317 C2CD4DB7Z1M9 353 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 BIN1O00499 593 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 DCXO43602 365 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 POU2F2P09086 479 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 FSHRP23945 695 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 PCSK1P29120 753 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 ALDH1A3P47895 512 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 LHX1P48742 406 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 CASP4P49662 377 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 VAMP7P51809 220 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 LRRC63Q05C16 580 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 PABPC1LQ4VXU2 614 aaKnown RBP12.99□□□□□ -0.33
SRP54-206ENST00000555317 COBLL1Q53SF7 1204 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 ISM2Q6H9L7 571 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 SPATA18Q8TC71 538 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.99□□□□□ -0.33
SRP54-206ENST00000555317 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 MAN1B1Q9UKM7 699 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
SRP54-206ENST00000555317 IKBKBO14920 756 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 STX10O60499 249 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 AKAP3O75969 853 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 PAPLNO95428 1278 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 P4HA1P13674 534 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 ATICP31939 592 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 PIK3CAP42336 1068 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 EPHB3P54753 998 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 TWF1Q12792 350 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 NCOA4Q13772 614 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 CAMK4Q16566 473 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 ZNF699Q32M78 642 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 WDR72Q3MJ13 1102 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 TDRD10Q5VZ19 366 aaKnown RBP12.98□□□□□ -0.33
SRP54-206ENST00000555317 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 ZDHHC14Q8IZN3 488 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 ADSSL1Q8N142 457 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 OR10T2Q8NGX3 314 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 CXorf38Q8TB03 319 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 C2orf15Q8WU43 125 aaKnown RBP12.98□□□□□ -0.33
SRP54-206ENST00000555317 BORCS6Q96GS4 357 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 DHTKD1Q96HY7 919 aaPredicted RBP12.98□□□□□ -0.33
SRP54-206ENST00000555317 ZNF512Q96ME7 567 aaPredicted RBP12.98□□□□□ -0.33
SRP54-206ENST00000555317 SEPT5Q99719 369 aaPredicted RBP12.98□□□□□ -0.33
SRP54-206ENST00000555317 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 IMPG2Q9BZV3 1241 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 SNX25Q9H3E2 840 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
SRP54-206ENST00000555317 YIPF1Q9Y548 306 aa12.98□□□□□ -0.33
SRP54-206ENST00000555317 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 BICDL2A1A5D9 508 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 MTMR11A4FU01 709 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 SLC16A3O15427 465 aaKnown RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 SEC24AO95486 1093 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 PTPN2P17706 415 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 TUFMP49411 452 aaKnown RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 MYL6P60660 151 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 DUSP4Q13115 394 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 VEPH1Q14D04 833 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 TAF12Q16514 161 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 NFE2Q16621 373 aaPredicted RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 CYP4A22Q5TCH4 519 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 CENPPQ6IPU0 288 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 PDZD4Q76G19 769 aaPredicted RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 DPH6Q7L8W6 267 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 FEZF2Q8TBJ5 459 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 SPPL2BQ8TCT7 592 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 PLEKHO2Q8TD55 490 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 ZNF516Q92618 1163 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 CORO1BQ9BR76 489 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 MMRN2Q9H8L6 949 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 ASAH2Q9NR71 780 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 ABI2Q9NYB9 513 aaPredicted RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 LIMD1Q9UGP4 676 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 MRPS23Q9Y3D9 190 aaKnown RBP12.97□□□□□ -0.33
SRP54-206ENST00000555317 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
SRP54-206ENST00000555317 PI4K2BG5E9Z4 385 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms