RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CCDC6Q16204 474 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 CYP4X1Q8N118 509 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 TMEM161BQ8NDZ6 487 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 EPS8L1Q8TE68 723 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 MFSD14AQ96MC6 490 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 NT5C1BQ96P26 610 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 GORASP1Q9BQQ3 440 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 MLXIPLQ9NP71 852 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 KMT5AQ9NQR1 393 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 ZNF212Q9UDV6 495 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 FETUBQ9UGM5 382 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 ZFP69BQ9UJL9 534 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
MTHFD1-210ENST00000555252 TISP43B9A030 160 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 SGPL1O95470 568 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 PDHA1P08559 390 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 TROVE2P10155 538 aaKnown RBP eCLIP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 DPEP1P16444 411 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 CHRNB2P17787 502 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 KCNA3P22001 575 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 NPTX2P47972 431 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 OAZ1P54368 228 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 UGCGQ16739 394 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 VSIG10LQ86VR7 867 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 ARHGAP24Q8N264 748 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 ZCCHC9Q8N567 271 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 FBXL13Q8NEE6 735 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 MCPH1Q8NEM0 835 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 FGD4Q96M96 766 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 TEPSINQ96N21 525 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 SMC6Q96SB8 1091 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 AS3MTQ9HBK9 375 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 SLC24A2Q9UI40 661 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 DNAJC6O75061 913 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 STAM2O75886 525 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 CCNE2O96020 404 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 ADRB2P07550 413 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 DLATP10515 647 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 GARTP22102 1010 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 SLC34A1Q06495 639 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 AP1B1Q10567 949 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 CCNG2Q16589 344 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 KCTD19Q17RG1 926 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 FAM91A1Q658Y4 838 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 FAM47EQ6ZV65 393 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 NOP9Q86U38 636 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 PPM1KQ8N3J5 372 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 SYNCQ9H7C4 482 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 KIAA1586Q9HCI6 787 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 IL1RAPL1Q9NZN1 696 aa11.29□□□□□ -0.6
MTHFD1-210ENST00000555252 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 VWA5AO00534 786 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CLDN3O15551 220 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ATP9AO75110 1047 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 RNF8O76064 485 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 NFASCO94856 1347 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 PSAPP07602 524 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CETPP11597 493 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ADCY8P40145 1251 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 PSMC4P43686 418 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TUBP50607 506 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DNAJC3Q13217 504 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TMED2Q15363 201 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 SNX30Q5VWJ9 437 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 NLRP9Q7RTR0 991 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CBWD2Q8IUF1 395 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 GATA6Q92908 595 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TRABDQ9H4I3 376 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 VCX3AQ9NNX9 186 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms