RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CCDC189A1A4V9 331 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 LRRC3CA6NJW4 275 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 SLC43A1O75387 559 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 SBK3P0C264 359 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 ANXA11P50995 505 aaKnown RBP6.61□□□□□ -1.35
VRK1-203ENST00000555067 NEK2P51955 445 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 DHX8Q14562 1220 aaKnown RBP6.61□□□□□ -1.35
VRK1-203ENST00000555067 ACAP2Q15057 778 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 PREPLQ4J6C6 727 aaPredicted RBP6.61□□□□□ -1.35
VRK1-203ENST00000555067 GADL1Q6ZQY3 521 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 Q8N9P0 234 aaPredicted RBP6.61□□□□□ -1.35
VRK1-203ENST00000555067 SNX19Q92543 992 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 FBXL20Q96IG2 436 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 KLHL32Q96NJ5 620 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 CALCOCO1Q9P1Z2 691 aa6.61□□□□□ -1.35
VRK1-203ENST00000555067 HMGB1P1B2RPK0 211 aaPredicted RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 E7ENX8 843 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 RPLP2P05387 115 aaKnown RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 WT1P19544 449 aaPredicted RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 C5AR1P21730 350 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 GRIA3P42263 894 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 MAPK10P53779 464 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 KRT85P78386 507 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 TAP2Q03519 686 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 MTMR1Q13613 665 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 DYRK1AQ13627 763 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 BRD3Q15059 726 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 PTPRRQ15256 657 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 KSR2Q6VAB6 950 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 PEG10Q86TG7 708 aaKnown RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 ADGRG5Q8IZF4 528 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 SARAFQ96BY9 339 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 PGBD1Q96JS3 809 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 MRGPRX4Q96LA9 322 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 SMAD5Q99717 465 aaKnown RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 CCDC8Q9H0W5 538 aaPredicted RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 KMT5AQ9NQR1 393 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 GNL3LQ9NVN8 582 aaKnown RBP6.6□□□□□ -1.35
VRK1-203ENST00000555067 IPPQ9Y573 584 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 KAT6AQ92794 2004 aa6.6□□□□□ -1.35
VRK1-203ENST00000555067 KLHL33A6NCF5 533 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 CGB1A6NKQ9 187 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 TOR1BO14657 336 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 HTRA2O43464 458 aaPredicted RBP6.59□□□□□ -1.35
VRK1-203ENST00000555067 WDHD1O75717 1129 aaPredicted RBP6.59□□□□□ -1.35
VRK1-203ENST00000555067 MT-CO1P00395 513 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 ANXA1P04083 346 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 SOX10P56693 466 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 ZNF280AP59817 542 aaPredicted RBP6.59□□□□□ -1.35
VRK1-203ENST00000555067 POU6F2P78424 691 aaPredicted RBP6.59□□□□□ -1.35
VRK1-203ENST00000555067 TLE1Q04724 770 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 HLTFQ14527 1009 aaKnown RBP eCLIP6.59□□□□□ -1.35
VRK1-203ENST00000555067 HLXQ14774 488 aaPredicted RBP6.59□□□□□ -1.35
VRK1-203ENST00000555067 SLC30A5Q8TAD4 765 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 LPIN2Q92539 896 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 FAXDC2Q96IV6 333 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 IL17RBQ9NRM6 502 aa6.59□□□□□ -1.35
VRK1-203ENST00000555067 NOB1Q9ULX3 412 aaKnown RBP6.59□□□□□ -1.35
VRK1-203ENST00000555067 IFRD1O00458 451 aaPredicted RBP6.58□□□□□ -1.36
VRK1-203ENST00000555067 XPOTO43592 962 aaKnown RBP6.58□□□□□ -1.36
VRK1-203ENST00000555067 SUN1O94901 812 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 GPD1P21695 349 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 GATA3P23771 443 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 ITKQ08881 620 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 CD300EQ496F6 205 aaPredicted RBP6.58□□□□□ -1.36
VRK1-203ENST00000555067 FLYWCH1Q4VC44 716 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 SYDE2Q5VT97 1194 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 PTF1AQ7RTS3 328 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 CFAP52Q8N1V2 620 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 TMIEQ8NEW7 156 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 TOR1AIP2Q8NFQ8 470 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 TFAP2BQ92481 460 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 HOOK2Q96ED9 719 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 RTFDC1Q9BY42 306 aaPredicted RBP6.58□□□□□ -1.36
VRK1-203ENST00000555067 CDH19Q9H159 772 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 MAN1C1Q9NR34 630 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 MRFAP1Q9Y605 127 aa6.58□□□□□ -1.36
VRK1-203ENST00000555067 CCDC154A6NI56 674 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 PRPF3O43395 683 aaKnown RBP6.57□□□□□ -1.36
VRK1-203ENST00000555067 ITIH3Q06033 890 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 PIN1Q13526 163 aaPredicted RBP6.57□□□□□ -1.36
VRK1-203ENST00000555067 TXNRD1Q16881 649 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 C3orf36Q3SXR2 165 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 ZNF788Q6ZQV5 615 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 TMPRSS9Q7Z410 1059 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 PDPRQ8NCN5 879 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 PNISRQ8TF01 805 aaKnown RBP6.57□□□□□ -1.36
VRK1-203ENST00000555067 MTMR8Q96EF0 704 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 CLPTM1LQ96KA5 538 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 IMPG2Q9BZV3 1241 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 ZNF700Q9H0M5 742 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 CPNE5Q9HCH3 593 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 AASDHPPTQ9NRN7 309 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 VSX1Q9NZR4 365 aaPredicted RBP6.57□□□□□ -1.36
VRK1-203ENST00000555067 LIMCH1Q9UPQ0 1083 aa6.57□□□□□ -1.36
VRK1-203ENST00000555067 CFAP20Q9Y6A4 193 aaKnown RBP6.57□□□□□ -1.36
VRK1-203ENST00000555067 MYBL2P10244 700 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms