RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PAN2Q504Q3 1202 aaKnown RBP18.57■□□□□ 0.56
SHOX-204ENST00000554971 TCERG1LQ5VWI1 586 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 ALS2CLQ60I27 953 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 ALKBH5Q6P6C2 394 aaKnown RBP18.57■□□□□ 0.56
SHOX-204ENST00000554971 C12orf56Q8IXR9 622 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 SP7Q8TDD2 431 aaPredicted RBP18.57■□□□□ 0.56
SHOX-204ENST00000554971 PGBD4Q96DM1 585 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 FBXL18Q96ME1 805 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 YME1L1Q96TA2 773 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 ZBED2Q9BTP6 218 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 STK33Q9BYT3 514 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 GCNT4Q9P109 453 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 PARP2Q9UGN5 583 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 GIT1Q9Y2X7 761 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 MYH10P35580 1976 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 SYCE1Q8N0S2 351 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 ZMAT2Q96NC0 199 aaKnown RBP18.57■□□□□ 0.56
SHOX-204ENST00000554971 TMEM117Q9H0C3 514 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 INSL6Q9Y581 213 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 TBKBP1A7MCY6 615 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 SOX1O00570 391 aaPredicted RBP18.56■□□□□ 0.56
SHOX-204ENST00000554971 SYF2O95926 243 aaKnown RBP18.56■□□□□ 0.56
SHOX-204ENST00000554971 CLTAP09496 248 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 SCNN1GP51170 649 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 CYP2J2P51589 502 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 ARID5AQ03989 594 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 RPS6KA1Q15418 735 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 XKR4Q5GH76 650 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 APBB1IPQ7Z5R6 666 aaPredicted RBP18.56■□□□□ 0.56
SHOX-204ENST00000554971 CBWD2Q8IUF1 395 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 SNX27Q96L92 541 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 ACAP3Q96P50 834 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 FAM213AQ9BRX8 229 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
SHOX-204ENST00000554971 CWC15Q9P013 229 aaKnown RBP18.56■□□□□ 0.56
SHOX-204ENST00000554971 INPP5FQ9Y2H2 1132 aa18.56■□□□□ 0.56
SHOX-204ENST00000554971 P4HA2O15460 535 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 NCK2O43639 380 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 CA3P07451 260 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 ADRB2P07550 413 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 H2AFZP0C0S5 128 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 FMO5P49326 533 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 CASP4P49662 377 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 TNNC1P63316 161 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 GLB1LQ6UWU2 654 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 H2AFVQ71UI9 128 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 GDF3Q9NR23 364 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 TBC1D13Q9NVG8 400 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 DMGDHQ9UI17 866 aaKnown RBP18.55■□□□□ 0.56
SHOX-204ENST00000554971 GOLGA6BA6NDN3 693 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 EXTL3O43909 919 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 OPA1O60313 960 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 N4BP1O75113 896 aaKnown RBP18.55■□□□□ 0.56
SHOX-204ENST00000554971 POMCP01189 267 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 CXCR5P32302 372 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 ACTN2P35609 894 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 APBA1Q02410 837 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 NOMO2Q5JPE7 1267 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 GLRA4Q5JXX5 417 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 SLFN11Q7Z7L1 901 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 GPD1LQ8N335 351 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 TMEM130Q8N3G9 435 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 ACTRT1Q8TDG2 376 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 UBN1Q9NPG3 1134 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 RBM12Q9NTZ6 932 aaKnown RBP18.55■□□□□ 0.56
SHOX-204ENST00000554971 PCDHA11Q9Y5I1 949 aa18.55■□□□□ 0.56
SHOX-204ENST00000554971 SCN1AP35498 2009 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 A6NNZ2 444 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 MAPK13O15264 365 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 HOXA2O43364 376 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 RNF40O75150 1001 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 IVLP07476 585 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 DNAJB2P25686 324 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 SOX5P35711 763 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 LMAN1P49257 510 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
SHOX-204ENST00000554971 BTG3Q14201 252 aaPredicted RBP18.54■□□□□ 0.56
SHOX-204ENST00000554971 TUBB8Q3ZCM7 444 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 LEKR1Q6ZMV7 388 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 ZNF280BQ86YH2 543 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 CMTR2Q8IYT2 770 aaKnown RBP18.54■□□□□ 0.56
SHOX-204ENST00000554971 HACE1Q8IYU2 909 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 ABI1Q8IZP0 508 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 LRRC57Q8N9N7 239 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 XXYLT1Q8NBI6 393 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 CWH43Q9H720 699 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 CNTN3Q9P232 1028 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 TMEM59LQ9UK28 342 aa18.54■□□□□ 0.56
SHOX-204ENST00000554971 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
SHOX-204ENST00000554971 LINC01553A4QN01 128 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 ERICH4A6NGS2 130 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 DDHD2O94830 711 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 MCCD1P59942 119 aaPredicted RBP18.53■□□□□ 0.56
SHOX-204ENST00000554971 SNRNP35Q16560 246 aaKnown RBP18.53■□□□□ 0.56
SHOX-204ENST00000554971 RDH13Q8NBN7 331 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 FAM84AQ96KN4 292 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 PPP1R10Q96QC0 940 aaKnown RBP18.53■□□□□ 0.56
SHOX-204ENST00000554971 SMIM28A0A1B0GU29 152 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 LACTBL1A8MY62 500 aa18.53■□□□□ 0.56
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