RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C15orf39Q6ZRI6 1047 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 ATAD1Q8NBU5 361 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-214ENST00000554928 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-214ENST00000554928 RPGRIP1Q96KN7 1286 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 LPIN3Q9BQK8 851 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 MRPL45Q9BRJ2 306 aaKnown RBP13.28□□□□□ -0.28
SYNE2-214ENST00000554928 PI4K2AQ9BTU6 479 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 SDCBP2Q9H190 292 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 PLEKHA4Q9H4M7 779 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 HCFC1R1Q9NWW0 138 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 MTMR11A4FU01 709 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 PSMA7O14818 248 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 CETN3O15182 167 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 MAPK13O15264 365 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 N4BP1O75113 896 aaKnown RBP13.27□□□□□ -0.29
SYNE2-214ENST00000554928 C1RP00736 705 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 ATF2P15336 505 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 LMO2P25791 158 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 RPL13P26373 211 aaKnown RBP13.27□□□□□ -0.29
SYNE2-214ENST00000554928 RAP1GAPP47736 663 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 NCOA4Q13772 614 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 ZACNQ401N2 412 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 LIN9Q5TKA1 542 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 CES5AQ6NT32 575 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 TAS1R2Q8TE23 839 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 HDAC7Q8WUI4 952 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
SYNE2-214ENST00000554928 SEMA4DQ92854 862 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 TSG101Q99816 390 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 PHF7Q9BWX1 381 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-214ENST00000554928 PRKD2Q9BZL6 878 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.29
SYNE2-214ENST00000554928 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 LOC730098B7Z3J9 87 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 DLL1O00548 723 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 GABRDO14764 452 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 HUS1O60921 280 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 PHACTR2O75167 634 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 ATP2C2O75185 946 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 HLA-DRAP01903 254 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 PAX3P23760 479 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 MTHFRP42898 656 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 CDH8P55286 799 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 MCCD1P59942 119 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 FKBP3Q00688 224 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 LRRC63Q05C16 580 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 PAK1Q13153 545 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 GPR17Q13304 367 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 TRPC3Q13507 836 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 DPCR1Q3MIW9 517 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 SCARA5Q6ZMJ2 495 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 GRASPQ7Z6J2 395 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 METTL23Q86XA0 190 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 TCEAL8Q8IYN2 117 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 TOP6BLQ8N6T0 577 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 TRIML1Q8N9V2 468 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 ST13P5Q8NFI4 369 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 PKMYT1Q99640 499 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 MKNK1Q9BUB5 465 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 SMYD3Q9H7B4 428 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 APOBEC3GQ9HC16 384 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 ZDHHC7Q9NXF8 308 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 DNMT3BQ9UBC3 853 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
SYNE2-214ENST00000554928 DSEQ9UL01 958 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 INSL5Q9Y5Q6 135 aa13.26□□□□□ -0.29
SYNE2-214ENST00000554928 C2orf16Q68DN1 1984 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 ARHGEF37A1IGU5 675 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 PRRG1O14668 218 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 EPB41P11171 864 aaKnown RBP13.25□□□□□ -0.29
SYNE2-214ENST00000554928 KRT13P13646 458 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 GPR15P49685 360 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
SYNE2-214ENST00000554928 MYO1EQ12965 1108 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 DUSP4Q13115 394 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 STIM1Q13586 685 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 WDR72Q3MJ13 1102 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 TPGS2Q68CL5 300 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 GJD3Q8N144 294 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 RIPOR3Q96MK2 946 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms