RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 HOXA13P31271 388 aaPredicted RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 CHKAP35790 457 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 TMEM53Q6P2H8 277 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 LRRC8BQ6P9F7 803 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 KLHL35Q6PF15 583 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 RHBDF2Q6PJF5 856 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 RASSF3Q86WH2 238 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 PDSS2Q86YH6 399 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 SUGT1Q9Y2Z0 365 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 MAGEC1O60732 1142 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 SPAG7O75391 227 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 FAM13AO94988 1023 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 CIITAP33076 1130 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 NR1H3Q13133 447 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 NET1Q7Z628 596 aaPredicted RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 CEP70Q8NHQ1 597 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 DQX1Q8TE96 717 aaKnown RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 SEPT11Q9NVA2 429 aaKnown RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 EURLQ9NYK6 297 aa16.49■□□□□ 0.23
SYNE3-203ENST00000554873 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
SYNE3-203ENST00000554873 TP73O15350 636 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 EIF3DO15371 548 aaKnown RBP eCLIP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 AP1G1O43747 822 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 PDE5AO76074 875 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 TRIM49P0CI25 452 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 TRIM49CP0CI26 452 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 UQCRBP14927 111 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 RPL5P46777 297 aaKnown RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 PDE1BQ01064 536 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 STAT4Q14765 748 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 KRT72Q14CN4 511 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 EAPPQ56P03 285 aaPredicted RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 HSP90AA5PQ58FG0 334 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 C6orf163Q5TEZ5 329 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 C1orf186Q6ZWK4 172 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 FBXO11Q86XK2 927 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 MAML1Q92585 1016 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 FAM161BQ96MY7 647 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 HSD17B14Q9BPX1 270 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 INTS2Q9H0H0 1204 aaKnown RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 NINJ2Q9NZG7 142 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 MTUS1Q9ULD2 1270 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 GRID1Q9ULK0 1009 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 UBAP1LF5GYI3 381 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 NDC80O14777 642 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 BUD23O43709 281 aaKnown RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 BAG2O95816 211 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 RARBP10826 455 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 ESRRAP11474 423 aaPredicted RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 TMED2Q15363 201 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 TRMT5Q32P41 509 aaKnown RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 NYAP2Q9P242 653 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
SYNE3-203ENST00000554873 ALG6Q9Y672 507 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 FRMPD4Q14CM0 1322 aa16.48■□□□□ 0.23
SYNE3-203ENST00000554873 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 ANKRD62A6NC57 917 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 FOXN3O00409 490 aaPredicted RBP16.47■□□□□ 0.23
SYNE3-203ENST00000554873 ALDH2P05091 517 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 ITIH2P19823 946 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
SYNE3-203ENST00000554873 CYP2J2P51589 502 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 CHN2P52757 468 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 TBL3Q12788 808 aaKnown RBP16.47■□□□□ 0.23
SYNE3-203ENST00000554873 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 NFIL3Q16649 462 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 LRRC6Q86X45 466 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 TTC1Q99614 292 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 MKNK1Q9BUB5 465 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 DNAJC6O75061 913 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 SLITRK3O94933 977 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 ZNF76P36508 570 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 SEL1L2Q5TEA6 688 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 C3orf62Q6ZUJ4 267 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 RFX8Q6ZV50 586 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 TRABD2AQ86V40 505 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 HSPBAP1Q96EW2 488 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 TTC25Q96NG3 672 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 FIZ1Q96SL8 496 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 GPAMQ9HCL2 828 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 DMAC2Q9NW81 257 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 HEY2Q9UBP5 337 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 APEX2Q9UBZ4 518 aa16.47■□□□□ 0.23
SYNE3-203ENST00000554873 TDRKHQ9Y2W6 561 aaKnown RBP16.47■□□□□ 0.23
SYNE3-203ENST00000554873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms