RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ECM1Q16610 540 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 SWT1Q5T5J6 900 aaKnown RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 CES5AQ6NT32 575 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 LLGL2Q6P1M3 1020 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 LRRC57Q8N9N7 239 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 CCDC43Q96MW1 224 aaKnown RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 RIT2Q99578 217 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 FTHL17Q9BXU8 183 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 ADAM7Q9H2U9 754 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 ACTR5Q9H9F9 607 aaPredicted RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 TUFT1Q9NNX1 390 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 NLRC4Q9NPP4 1024 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 LCMT1Q9UIC8 334 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 MYH11P35749 1972 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 NRCAMQ92823 1304 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 A0A087X0T9 212 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 FAM187AA6NFU0 413 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 MIF4GDA9UHW6 222 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 P4HA2O15460 535 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 MAFGO15525 162 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 ZMYND10O75800 440 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 GLI1P08151 1106 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 FAM228BP0C875 321 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 SDHBP21912 280 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 KLRC1P26715 233 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 CD52P31358 61 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 MDH1P40925 334 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 STAT1P42224 750 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 GATMP50440 423 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 DRG2P55039 364 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 JAM2P57087 298 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 PLPP4Q5VZY2 271 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 ALKBH5Q6P6C2 394 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 METTL7BQ6UX53 244 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 RSPH3Q86UC2 560 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 CCDC50Q8IVM0 306 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 CASP10Q92851 521 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 CENPTQ96BT3 561 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRP54-205ENST00000554803 STMN4Q9H169 189 aaPredicted RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 CARD9Q9H257 536 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 AGO3Q9H9G7 860 aaKnown RBP11.88□□□□□ -0.51
SRP54-205ENST00000554803 AAASQ9NRG9 546 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 PARP2Q9UGN5 583 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 NAGPAQ9UK23 515 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 TFR2Q9UP52 801 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 LZTS1Q9Y250 596 aa11.88□□□□□ -0.51
SRP54-205ENST00000554803 EVPLQ92817 2033 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 NFASCO94856 1347 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 GOLGA6L7A0A1B0GV03 622 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TRIM66O15016 1216 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 BUB1O43683 1085 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TMEM253P0C7T8 217 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 SPATA31C1P0DKV0 1188 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 LSP1P33241 339 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 PSMC2P35998 433 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 MTHFRP42898 656 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 MATR3P43243 847 aaKnown RBP eCLIP11.87□□□□□ -0.51
SRP54-205ENST00000554803 CCT5P48643 541 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 SP4Q02446 784 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 CYP4A11Q02928 519 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 LMNB2Q03252 620 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 DHX34Q14147 1143 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 EPHA7Q15375 998 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TTMPQ5BVD1 217 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 SPOUT1Q5T280 376 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 ZC3H14Q6PJT7 736 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 CYFIP1Q7L576 1253 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 MIER3Q7Z3K6 550 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 PEX26Q7Z412 305 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 HOOK3Q86VS8 718 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 RHOT2Q8IXI1 618 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 OTUD6BQ8N6M0 293 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TSEN2Q8NCE0 465 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 TPCN2Q8NHX9 752 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 HDAC7Q8WUI4 952 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 RFFLQ8WZ73 363 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 HPS3Q969F9 1004 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 DYDC2Q96IM9 177 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 KRT12Q99456 494 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 EIF2AK1Q9BQI3 630 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 STK33Q9BYT3 514 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms