RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 GPR88Q9GZN0 384 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 LMAN1LQ9HAT1 526 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 NDRG2Q9UN36 371 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 DERAQ9Y315 318 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 ANAPC1Q9H1A4 1944 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ZNF263O14978 683 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 PPP1R37O75864 691 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 BMP15O95972 392 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 TGM1P22735 817 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 CDR1P51861 262 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 EPHB3P54753 998 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 MLLT6P55198 1093 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 FCHO2Q0JRZ9 810 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 CUL4AQ13619 759 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 BRAPQ7Z569 592 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 LRRTM3Q86VH5 581 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 EPC1Q9H2F5 836 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ZHX3Q9H4I2 956 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ASB7Q9H672 318 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 DLL3Q9NYJ7 618 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 HSFX1Q9UBD0 423 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ASB3Q9Y575 518 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
MTHFD1-207ENST00000554677 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 CHADO15335 359 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 ODC1P11926 461 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 PAX3P23760 479 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 CCNE1P24864 410 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 ALDH1A3P47895 512 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 WNT7BP56706 349 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 KCNA1Q09470 495 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 PLD1Q13393 1074 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 TMEM132DQ14C87 1099 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 SCARA3Q6AZY7 606 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 EFCAB13Q8IY85 973 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 ZSWIM2Q8NEG5 633 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 E2F7Q96AV8 911 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 DNAJC19Q96DA6 116 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 LPIN3Q9BQK8 851 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 ZCWPW1Q9H0M4 648 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 SLITRK6Q9H5Y7 841 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 DPP3Q9NY33 737 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 C2CD2Q9Y426 696 aa13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-207ENST00000554677 MED19A0JLT2 244 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 MYMKA6NI61 221 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 CYB561D2O14569 222 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 ATF6P18850 670 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 WEE1P30291 646 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 SOX9P48436 509 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 POU5F1Q01860 360 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 SLC39A12Q504Y0 691 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 WSCD1Q658N2 575 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 TXNDC11Q6PKC3 985 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 DYMQ7RTS9 669 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 SFR1Q86XK3 245 aa13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-207ENST00000554677 MYBPHLA2RUH7 354 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 TBCAO75347 108 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 PRAMEF12O95522 483 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 GABRR2P28476 465 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 ABCD1P33897 745 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 TAF6P49848 677 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 PUM1Q14671 1186 aaKnown RBP eCLIP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 GPR158Q5T848 1215 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 TMEM150AQ86TG1 271 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 ZFYVE19Q96K21 471 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 CLIC6Q96NY7 704 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 PYM1Q9BRP8 204 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 IER2Q9BTL4 223 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 C2orf42Q9NWW7 574 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 OBP2AQ9NY56 170 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 SMG5Q9UPR3 1016 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 EML5Q05BV3 1969 aa13.21□□□□□ -0.29
MTHFD1-207ENST00000554677 SLC38A8A6NNN8 435 aa13.2□□□□□ -0.3
MTHFD1-207ENST00000554677 HAPLN1P10915 354 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-207ENST00000554677 HOXC13P31276 330 aa13.2□□□□□ -0.3
MTHFD1-207ENST00000554677 CYP4F8P98187 520 aa13.2□□□□□ -0.3
MTHFD1-207ENST00000554677 SATB1Q01826 763 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms