RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 FAM187BQ17R55 369 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 CCDC142Q17RM4 750 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 SLC10A6Q3KNW5 377 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM160B1Q5W0V3 765 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 CD300LGQ6UXG3 332 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 RTN4RL1Q86UN2 441 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM228AQ86W67 206 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 RHPN2Q8IUC4 686 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 CCAR2Q8N163 923 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 SMG8Q8ND04 991 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 GSTCDQ8NEC7 633 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 LNX1Q8TBB1 728 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 SLC20A1Q8WUM9 679 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 DNAJB3Q8WWF6 145 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 HVCN1Q96D96 273 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 PPP1R13BQ96KQ4 1090 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM167AQ96KS9 214 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 NLRP4Q96MN2 994 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 SRPK1Q96SB4 655 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 PCDHB18PQ96TA0 734 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 OSMRQ99650 979 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM213AQ9BRX8 229 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 PACSIN1Q9BY11 444 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 ZCCHC2Q9C0B9 1178 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 PHACTR1Q9C0D0 580 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 LRRC27Q9C0I9 530 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 INTS2Q9H0H0 1204 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM49AQ9H0Q0 323 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 XYLT2Q9H1B5 865 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 NLRC4Q9NPP4 1024 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM207AQ9NSI2 230 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 TRMT13Q9NUP7 481 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 LARSQ9P2J5 1176 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 IMPACTQ9P2X3 320 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FOXD3Q9UJU5 478 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 FAM184BQ9ULE4 1060 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 STRIP2Q9ULQ0 834 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 Q9Y3F1 56 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 HCN4Q9Y3Q4 1203 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 NOC2LQ9Y3T9 749 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 HES2Q9Y543 173 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 DUSP10Q9Y6W6 482 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 NOP56O00567 594 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DDX3XO00571 662 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 ACKR2O00590 384 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 MAPK13O15264 365 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 FKTNO75072 461 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 TNFRSF21O75509 655 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 ASGR1P07306 291 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 NFICP08651 508 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 HSPA8P11142 646 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 AKR1A1P14550 325 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DARSP14868 501 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 CYP3A5P20815 502 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 GARTP22102 1010 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 ADH6P28332 368 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 KRT9P35527 623 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 SOX9P48436 509 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 VAMP7P51809 220 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 MYBPC2Q14324 1141 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 PSMD6Q15008 389 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 SNX17Q15036 470 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 SNRNP35Q16560 246 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DGKDQ16760 1214 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 ZACNQ401N2 412 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 BRDTQ58F21 947 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 FIGNQ5HY92 759 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 C1orf53Q5VUE5 145 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 LLGL2Q6P1M3 1020 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 NFRKBQ6P4R8 1299 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 FIGNL1Q6PIW4 674 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 OTUD6AQ7L8S5 288 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 ZNF571Q7Z3V5 609 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 SERINC5Q86VE9 423 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 BRSK2Q8IWQ3 736 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 XXYLT1Q8NBI6 393 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 SLC30A5Q8TAD4 765 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 RHBDD1Q8TEB9 315 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DIS3LQ8TF46 1054 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 WDR24Q96S15 920 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 LPIN3Q9BQK8 851 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 NFKBIZQ9BYH8 718 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 SENP6Q9GZR1 1112 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 TRPV6Q9H1D0 765 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 C17orf75Q9HAS0 396 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 PLCB1Q9NQ66 1216 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 NRBP2Q9NSY0 501 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 MIOSQ9NXC5 875 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 TAS2R14Q9NYV8 317 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 HMGXB4Q9UGU5 601 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 ARMCX3Q9UH62 379 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 DDX20Q9UHI6 824 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms