RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 ASCL5Q7RTU5 278 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 FRMD5Q7Z6J6 570 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 TMC8Q8IU68 726 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 C1orf210Q8IVY1 113 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 MFSD6LQ8IWD5 586 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 CXorf38Q8TB03 319 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF507Q8TCN5 953 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 DNASE1L2Q92874 299 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 PSMG2Q969U7 264 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 CLDN23Q96B33 292 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 SAAL1Q96ER3 474 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 C7orf25Q9BPX7 421 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 CBWD1Q9BRT8 395 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 FOXQ1Q9C009 403 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 TRIM9Q9C026 710 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 SEMA4AQ9H3S1 761 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 LTB4R2Q9NPC1 389 aa12□□□□□ -0.49
ABCD4-221ENST00000554453 MTF2Q9Y483 593 aaPredicted RBP12□□□□□ -0.49
ABCD4-221ENST00000554453 MIA3Q5JRA6 1907 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 FANCMQ8IYD8 2048 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 GPR179Q6PRD1 2367 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 GVINP1Q7Z2Y8 2422 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 SHISA7A6NL88 538 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 NCAM2O15394 837 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 LRRN2O75325 713 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 FGF19O95750 216 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 WEE1P30291 646 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 VIPR2P41587 438 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 MAGEA9P43362 315 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 TFAMQ00059 246 aaKnown RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 FZD5Q13467 585 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 SV2CQ496J9 727 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 SLC39A12Q504Y0 691 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF852Q6ZMS4 543 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 DCP1BQ8IZD4 617 aaKnown RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 CSGALNACT2Q8N6G5 542 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 TTC9BQ8N6N2 239 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 C1orf127Q8N9H9 656 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 ZSCAN18Q8TBC5 510 aaPredicted RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 C2orf15Q8WU43 125 aaKnown RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 DEPDC1BQ8WUY9 529 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 IRF7Q92985 503 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 NKD2Q969F2 451 aaPredicted RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 DHX58Q96C10 678 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 BRD9Q9H8M2 597 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 PDE11AQ9HCR9 933 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF334Q9HCZ1 680 aaPredicted RBP11.99□□□□□ -0.49
ABCD4-221ENST00000554453 AGAP1Q9UPQ3 857 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 SDK1Q7Z5N4 2213 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 OTOGLQ3ZCN5 2332 aa11.99□□□□□ -0.49
ABCD4-221ENST00000554453 A0A1W2PRU2 124 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 PRR23AA6NEV1 266 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 HEPACAM2A8MVW5 462 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 MAN2B1O00754 1011 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 F13A1P00488 732 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 HAPLN1P10915 354 aaPredicted RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 CD72P21854 359 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 HOXD13P35453 343 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 MLLT6P55198 1093 aaPredicted RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 RBP5P82980 135 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 UBXN2BQ14CS0 331 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 SURF1Q15526 300 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 FOXD4L5Q5VV16 416 aaPredicted RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 SCARA3Q6AZY7 606 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 VITQ6UXI7 678 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 EPM2AIP1Q7L775 607 aaPredicted RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 HSCBQ8IWL3 235 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 GPD1LQ8N335 351 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 GLIS3Q8NEA6 775 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 SPPL2BQ8TCT7 592 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 KCNG4Q8TDN1 519 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 FOXD4L4Q8WXT5 416 aaPredicted RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF560Q96MR9 790 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 ACBD6Q9BR61 282 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 BCO2Q9BYV7 579 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 KIAA1586Q9HCI6 787 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 HEBP1Q9NRV9 189 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 GDAP2Q9NXN4 497 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 RCOR1Q9UKL0 485 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 ITGA11Q9UKX5 1188 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 CFAP45Q9UL16 551 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 PCDHA7Q9UN72 937 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 MRPS17Q9Y2R5 130 aaKnown RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 SPTBN4Q9H254 2564 aa11.98□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF638Q14966 1978 aaKnown RBP11.98□□□□□ -0.49
ABCD4-221ENST00000554453 PVALEFA0A1B0GWK0 134 aa11.97□□□□□ -0.49
ABCD4-221ENST00000554453 ZNF263O14978 683 aa11.97□□□□□ -0.49
ABCD4-221ENST00000554453 EIF3DO15371 548 aaKnown RBP eCLIP11.97□□□□□ -0.49
ABCD4-221ENST00000554453 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
ABCD4-221ENST00000554453 HUS1O60921 280 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms