RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CMA1P23946 247 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 HOXD13P35453 343 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 CLCN5P51795 746 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 EPHA5P54756 1037 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 VCPP55072 806 aaKnown RBP11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 SURF1Q15526 300 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 BMT2Q1RMZ1 405 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 PRSS36Q5K4E3 855 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 IQCEQ6IPM2 695 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 METTL23Q86XA0 190 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 GLIS3Q8NEA6 775 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 RSAD2Q8WXG1 361 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 HPS3Q969F9 1004 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 BORCS6Q96GS4 357 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 SPATA32Q96LK8 384 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 FBXL21Q9UKT6 434 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 YIPF1Q9Y548 306 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 NUMBLQ9Y6R0 609 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 FAM237AA0A1B0GTK4 181 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 MTMR11A4FU01 709 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 GOLGA8IPA6NC78 632 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 GOLGA8JA6NMD2 632 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 CYB561D2O14569 222 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 NARSO43776 548 aaKnown RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 VNN2O95498 520 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 ITGB3P05106 788 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 NUDT7P0C024 238 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 PTPN5P54829 565 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 WNT7BP56706 349 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 TFAMQ00059 246 aaKnown RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 TWF1Q12792 350 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 SLC5A9Q2M3M2 681 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 CYP4A22Q5TCH4 519 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 PDZD4Q76G19 769 aaPredicted RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 C12orf56Q8IXR9 622 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 THEM5Q8N1Q8 247 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZSWIM2Q8NEG5 633 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 CXorf38Q8TB03 319 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 C2orf15Q8WU43 125 aaKnown RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 SCFD1Q8WVM8 642 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 FGF14Q92915 247 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZNF512Q96ME7 567 aaPredicted RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 CORO1BQ9BR76 489 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZCWPW1Q9H0M4 648 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 IRF2BPLQ9H1B7 796 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 MFSD1Q9H3U5 465 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 PCIF1Q9H4Z3 704 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 PDE11AQ9HCR9 933 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 AGPAT3Q9NRZ7 376 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 HSPBP1Q9NZL4 362 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 CEP72Q9P209 647 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 HPSEQ9Y251 543 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 ASB3Q9Y575 518 aa11.22□□□□□ -0.61
PTCD2P1-201ENST00000554393 TGFB1I1O43294 461 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 ECI2O75521 394 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 OR4Q2P0C623 313 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 TMEM191BP0C7N4 346 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 PFKFB1P16118 471 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 AOC1P19801 751 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 POLR2BP30876 1174 aaKnown RBP11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 AFMP43652 599 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 EPHB3P54753 998 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 DUSP4Q13115 394 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 CUL4BQ13620 913 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 BECN1Q14457 450 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 CWF19L1Q69YN2 538 aaKnown RBP11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 PARM1Q6UWI2 310 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 WDR49Q8IV35 697 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 SIX5Q8N196 739 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 TMEM86AQ8N2M4 240 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 PRSS33Q8NF86 280 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 OR10T2Q8NGX3 314 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 GOLGA5Q8TBA6 731 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 TMEM174Q8WUU8 243 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 PGLYRP2Q96PD5 576 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 RTP3Q9BQQ7 232 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 MTMR12Q9C0I1 747 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 BLZF1Q9H2G9 400 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 CRISPLD1Q9H336 500 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 ASAH2Q9NR71 780 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 INTS13Q9NVM9 706 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 GDAP2Q9NXN4 497 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 SERTAD1Q9UHV2 236 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 AGAP1Q9UPQ3 857 aa11.21□□□□□ -0.61
PTCD2P1-201ENST00000554393 OBSL1O75147 1896 aa11.21□□□□□ -0.62
PTCD2P1-201ENST00000554393 CACNA1GO43497 2377 aa11.2□□□□□ -0.62
PTCD2P1-201ENST00000554393 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
PTCD2P1-201ENST00000554393 PTPRDP23468 1912 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms