RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 PNPLA4P41247 253 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 NAP1L1P55209 391 aaKnown RBP20.36■□□□□ 0.85
SNRPN-207ENST00000554227 SV2CQ496J9 727 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 C2CD6Q53TS8 623 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 NAA35Q5VZE5 725 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 ACAD10Q6JQN1 1059 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.36■□□□□ 0.85
SNRPN-207ENST00000554227 TXLNBQ8N3L3 684 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 VWCEQ96DN2 955 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 TMEM176AQ96HP8 235 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 LPIN3Q9BQK8 851 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 GDAP2Q9NXN4 497 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 L1RE1Q9UN81 338 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.36■□□□□ 0.85
SNRPN-207ENST00000554227 ANKRD62A6NC57 917 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 ATMINO43313 823 aaPredicted RBP20.36■□□□□ 0.85
SNRPN-207ENST00000554227 CXCL10P02778 98 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 TMEM253P0C7T8 217 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 ITGB8P26012 769 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 GATMP50440 423 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 PAN2Q504Q3 1202 aaKnown RBP20.36■□□□□ 0.85
SNRPN-207ENST00000554227 DPH6Q7L8W6 267 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 NECAB2Q7Z6G3 386 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 KBTBD7Q8WVZ9 684 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 INTUQ9ULD6 942 aa20.36■□□□□ 0.85
SNRPN-207ENST00000554227 TUBB4AP04350 444 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 PAEPP09466 180 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 GRIK3Q13003 919 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 UPP1Q16831 310 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 GLB1LQ6UWU2 654 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 PHLDB2Q86SQ0 1253 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 ZNF280BQ86YH2 543 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 C12orf29Q8N999 325 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 OR6B3Q8NGW1 331 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 HEXIM2Q96MH2 286 aaKnown RBP20.35■□□□□ 0.85
SNRPN-207ENST00000554227 OSGEPQ9NPF4 335 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 TMEM161AQ9NX61 479 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 MYO1AQ9UBC5 1043 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 MICAL3Q7RTP6 2002 aa20.35■□□□□ 0.85
SNRPN-207ENST00000554227 TRIM43BA6NCK2 446 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 F8W810 466 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 ENC1O14682 589 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 INPPL1O15357 1258 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 DDHD2O94830 711 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 PDGFRBP09619 1106 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 LMO2P25791 158 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 NOP2P46087 812 aaKnown RBP20.34■□□□□ 0.85
SNRPN-207ENST00000554227 NOMO3P69849 1222 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 DENND1BQ6P3S1 775 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 ACOT1Q86TX2 421 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 CTNNBL1Q8WYA6 563 aaPredicted RBP20.34■□□□□ 0.85
SNRPN-207ENST00000554227 APBB2Q92870 758 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 TRIM43Q96BQ3 446 aaPredicted RBP20.34■□□□□ 0.85
SNRPN-207ENST00000554227 NT5C1AQ9BXI3 368 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 DPEP3Q9H4B8 488 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
SNRPN-207ENST00000554227 BTNL10A8MVZ5 291 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 I3L4J1 428 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 CYB561D2O14569 222 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 EN2P19622 333 aaPredicted RBP20.34■□□□□ 0.85
SNRPN-207ENST00000554227 TUSC3Q13454 348 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 NOMO2Q5JPE7 1267 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 LLGL2Q6P1M3 1020 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 CD300LGQ6UXG3 332 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 LIMS2Q7Z4I7 341 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 OSTM1Q86WC4 334 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 WDTC1Q8N5D0 677 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 RNF10Q8N5U6 811 aaKnown RBP20.34■□□□□ 0.85
SNRPN-207ENST00000554227 APPL2Q8NEU8 664 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 SLC35G2Q8TBE7 412 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 HASPINQ8TF76 798 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 NOX5Q96PH1 765 aa20.34■□□□□ 0.85
SNRPN-207ENST00000554227 ATP8B3O60423 1300 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 HUS1O60921 280 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 TACC1O75410 805 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 RPL9P32969 192 aaKnown RBP20.33■□□□□ 0.84
SNRPN-207ENST00000554227 WSCD1Q658N2 575 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 PDCL2Q8N4E4 241 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 C1orf131Q8NDD1 294 aaKnown RBP20.33■□□□□ 0.84
SNRPN-207ENST00000554227 SENP8Q96LD8 212 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 GOLPH3Q9H4A6 298 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 COG5Q9UP83 839 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 PCDHB7Q9Y5E2 793 aa20.33■□□□□ 0.84
SNRPN-207ENST00000554227 TIMM13Q9Y5L4 95 aaPredicted RBP20.33■□□□□ 0.84
SNRPN-207ENST00000554227 NCANO14594 1321 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 A8MXQ7 604 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 PALMO75781 387 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 ITGB1P05556 798 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 GNL1P36915 607 aaPredicted RBP20.32■□□□□ 0.84
SNRPN-207ENST00000554227 BRCC3P46736 316 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 GPC5P78333 572 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 CENPCQ03188 943 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 TIGD5Q53EQ6 642 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 TRIM72Q6ZMU5 477 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.32■□□□□ 0.845e-7■■□□□ 13
SNRPN-207ENST00000554227 MCOLN2Q8IZK6 566 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 ZNF653Q96CK0 615 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 TBC1D13Q9NVG8 400 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 PCDHGC3Q9UN70 934 aa20.32■□□□□ 0.84
SNRPN-207ENST00000554227 GRID2IPA4D2P6 1211 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms