RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 THAP12O43422 761 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 MED7O43513 233 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 TRAPPC3O43617 180 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 KRT86O43790 486 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 DGKIO75912 1065 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 DDHD2O94830 711 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 TUBB4AP04350 444 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ODC1P11926 461 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 CHRNB2P17787 502 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 TYMPP19971 482 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 TNFAIP3P21580 790 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 RAP1GAPP47736 663 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 LHX1P48742 406 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 NDST1P52848 882 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 RAD23BP54727 409 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 CDH8P55286 799 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 GFPT1Q06210 699 aaPredicted RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 KIF5AQ12840 1032 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ELAVL2Q12926 359 aaKnown RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 ARHGAP29Q52LW3 1261 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 DSTYKQ6XUX3 929 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.15□□□□□ -1.1
TDP1-209ENST00000554180 KIAA1328Q86T90 577 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ZNF280BQ86YH2 543 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 C7orf61Q8IZ16 206 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 PDCL2Q8N4E4 241 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 SLC4A11Q8NBS3 891 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ACRBPQ8NEB7 543 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 LNX1Q8TBB1 728 aaPredicted RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 SLC20A1Q8WUM9 679 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ZNF606Q8WXB4 792 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ZNF689Q96CS4 500 aaPredicted RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 ABHD8Q96I13 439 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 TNIP3Q96KP6 325 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 PPP1R13BQ96KQ4 1090 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 SENP8Q96LD8 212 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 MRPL45Q9BRJ2 306 aaKnown RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 ZNF518BQ9C0D4 1074 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 STXBP5LQ9Y2K9 1186 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 REXO2Q9Y3B8 237 aaKnown RBP8.15□□□□□ -1.1
TDP1-209ENST00000554180 CEP83Q9Y592 693 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 PCDHA13Q9Y5I0 950 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 SCN1AP35498 2009 aa8.15□□□□□ -1.11
TDP1-209ENST00000554180 SF3B1O75533 1304 aaKnown RBP eCLIP8.14□□□□□ -1.114e-7■■■■■ 133.7
TDP1-209ENST00000554180 TBKBP1A7MCY6 615 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 BTNL10A8MVZ5 291 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 A8MXQ7 604 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 KIF2AO00139 706 aaPredicted RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 SYN3O14994 580 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 B4GALT3O60512 393 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 RTN2O75298 545 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 KIF4AO95239 1232 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 FGBP02675 491 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CYP1A1P04798 512 aaPredicted RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 MMEP08473 750 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 VDRP11473 427 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CD19P15391 556 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 PCSK1P29120 753 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CDH5P33151 784 aaPredicted RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 GNL1P36915 607 aaPredicted RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 MAGEA1P43355 309 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CYP27A1Q02318 531 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CENPCQ03188 943 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CNGA2Q16280 664 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 TIGD5Q53EQ6 642 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 ZNF394Q53GI3 561 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 SGO2Q562F6 1265 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CCDC122Q5T0U0 273 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 TAF3Q5VWG9 929 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CD300LGQ6UXG3 332 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 C16orf59Q7L2K0 433 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 METTL23Q86XA0 190 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 REXO1L1PQ8IX06 675 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 CMTR2Q8IYT2 770 aaKnown RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 CRYBG2Q8N1P7 616 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 OR6B3Q8NGW1 331 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 BADQ92934 168 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 TWNKQ96RR1 684 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 PAAF1Q9BRP4 392 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 COLEC11Q9BWP8 271 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 ELOVL4Q9GZR5 314 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 ISCUQ9H1K1 167 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 LHX5Q9H2C1 402 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 MTIF3Q9H2K0 278 aaKnown RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 SNX25Q9H3E2 840 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 NRDE2Q9H7Z3 1164 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 ACP6Q9NPH0 428 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 SEPT11Q9NVA2 429 aaKnown RBP8.14□□□□□ -1.11
TDP1-209ENST00000554180 MYO1AQ9UBC5 1043 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 HMGXB4Q9UGU5 601 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 ADAM28Q9UKQ2 775 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 PCDHB8Q9UN66 801 aa8.14□□□□□ -1.11
TDP1-209ENST00000554180 A0A0A6YYK5 440 aaPredicted RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 USP27XA6NNY8 438 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 O00370 1275 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms