RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 FAM189A1O60320 539 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 MGEA5O60502 916 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 FGFR4P22455 802 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 CASP14P31944 242 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 GRM5P41594 1212 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 GCLMP48507 274 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 DLG4P78352 724 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 ZBED6P86452 979 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 KCNMA1Q12791 1236 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 ATAT1Q5SQI0 421 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 WDR49Q8IV35 697 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 LRRC8AQ8IWT6 810 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 CD302Q8IX05 232 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 RTKNQ9BST9 563 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 CRACR2AQ9BSW2 395 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 NGRNQ9NPE2 291 aaKnown RBP15.56■□□□□ 0.08
SHMT2-208ENST00000553868 CHST12Q9NRB3 414 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 ZNHIT6Q9NWK9 470 aaKnown RBP15.56■□□□□ 0.08
SHMT2-208ENST00000553868 DLGAP2Q9P1A6 1054 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 CEP72Q9P209 647 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 LZTS1Q9Y250 596 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 PCDHB7Q9Y5E2 793 aa15.56■□□□□ 0.08
SHMT2-208ENST00000553868 SETXQ7Z333 2677 aaKnown RBP15.56■□□□□ 0.08
SHMT2-208ENST00000553868 NPTXRO95502 500 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 FGFR1P11362 822 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 GLULP15104 373 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PON1P27169 355 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 HOXA11P31270 313 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 CA8P35219 290 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 KRT9P35527 623 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 YARSP54577 528 aaKnown RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PLCB3Q01970 1234 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PPP3CAQ08209 521 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PAK2Q13177 524 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 CBWD6Q4V339 395 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 CBWD3Q5JTY5 395 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 CBWD5Q5RIA9 395 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 ZBTB41Q5SVQ8 909 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 C1orf220Q5T0J3 134 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 TMC5Q6UXY8 1006 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 FAM228AQ86W67 206 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 FMNL3Q8IVF7 1028 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 HACE1Q8IYU2 909 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 OR8K1Q8NGG5 319 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PLEKHO2Q8TD55 490 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 TMEM40Q8WWA1 233 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 ACAP3Q96P50 834 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 NAA15Q9BXJ9 866 aaKnown RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 TMEM117Q9H0C3 514 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 INTS2Q9H0H0 1204 aaKnown RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 ASB7Q9H672 318 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PDE11AQ9HCR9 933 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 PUF60Q9UHX1 559 aaKnown RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 FBXL5Q9UKA1 691 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 USP18Q9UMW8 372 aa15.55■□□□□ 0.08
SHMT2-208ENST00000553868 NOC2LQ9Y3T9 749 aaKnown RBP15.55■□□□□ 0.08
SHMT2-208ENST00000553868 TTC26A0AVF1 554 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 C2orf71A6NGG8 1288 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 PRR5-ARHGAP8B1AHC4 643 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 LRRN2O75325 713 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TNNC2P02585 160 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 EPCAMP16422 314 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TGM1P22735 817 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TNFSF9P41273 254 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 KLK7P49862 253 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 ADKP55263 362 aaKnown RBP15.54■□□□□ 0.08
SHMT2-208ENST00000553868 ARHGAP8P85298 464 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 LMNB2Q03252 620 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 ENOX2Q16206 610 aaKnown RBP15.54■□□□□ 0.08
SHMT2-208ENST00000553868 DUOXA2Q1HG44 320 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TRIM65Q6PJ69 517 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 CDR2LQ86X02 465 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-208ENST00000553868 NT5DC4Q86YG4 428 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 MRPL43Q8N983 215 aaKnown RBP15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TC2NQ8N9U0 490 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 EHBP1Q8NDI1 1231 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 FBXL13Q8NEE6 735 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 FAM81BQ96LP2 452 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TSPAN18Q96SJ8 248 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 PLEKHA5Q9HAU0 1116 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 PARD6AQ9NPB6 346 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 TOPORSQ9NS56 1045 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-208ENST00000553868 COQ4Q9Y3A0 265 aa15.54■□□□□ 0.08
SHMT2-208ENST00000553868 ZZEF1O43149 2961 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 PHACTR2O75167 634 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 ZSCAN20P17040 1043 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 SLC9A1P19634 815 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 POLR2FP61218 127 aaKnown RBP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 OSTNP61366 133 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 NFX1Q12986 1120 aaKnown RBP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 BIRC3Q13489 604 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 ZACNQ401N2 412 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 SEZ6Q53EL9 994 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 KLHDC7AQ5VTJ3 777 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 SV2AQ7L0J3 742 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms