RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 BMT2Q1RMZ1 405 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 SV2CQ496J9 727 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 CTXN3Q4LDR2 81 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ATAT1Q5SQI0 421 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ZBTB41Q5SVQ8 909 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 ZNF280DQ6N043 979 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 PRSS55Q6UWB4 352 aaPredicted RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 TMEM184AQ6ZMB5 413 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 PALB2Q86YC2 1186 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 TSEN2Q8NCE0 465 aaKnown RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 HDAC7Q8WUI4 952 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 FBXL18Q96ME1 805 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 NECTIN4Q96NY8 510 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 GSDMAQ96QA5 445 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 UHRF1Q96T88 793 aaPredicted RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 TSG101Q99816 390 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 VN1R3Q9BXE9 311 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 OXCT2Q9BYC2 517 aaPredicted RBP9□□□□□ -0.97
PSEN1-209ENST00000553855 FGFBP2Q9BYJ0 223 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 CXCL16Q9H2A7 254 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 SFXN1Q9H9B4 322 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 PIDD1Q9HB75 910 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 CACNG4Q9UBN1 327 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 DSEQ9UL01 958 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 KIAA1671Q9BY89 1806 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
PSEN1-209ENST00000553855 I3L4J1 428 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 PDXKO00764 312 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 MBTPS2O43462 519 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 FAM189A1O60320 539 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 PHACTR2O75167 634 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 TBX10O75333 385 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 NFICP08651 508 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 DLATP10515 647 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 KRT13P13646 458 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 EPCAMP16422 314 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 TKTP29401 623 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 LTBRP36941 435 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 CLCN4P51793 760 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 ARPP19P56211 112 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 RBP5P82980 135 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 YWHAHQ04917 246 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 MYO1EQ12965 1108 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 TRPC3Q13507 836 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 PNOCQ13519 176 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 MYBPC2Q14324 1141 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 ZBTB6Q15916 424 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 SNRNP35Q16560 246 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 INTS6LQ5JSJ4 861 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 RTP2Q5QGT7 225 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 RARS2Q5T160 578 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 C9orf57Q5W0N0 161 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 CRELD2Q6UXH1 353 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 CYP26C1Q6V0L0 522 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 CCDC149Q6ZUS6 474 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 VASH1Q7L8A9 365 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 C12orf56Q8IXR9 622 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 THEM5Q8N1Q8 247 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 GUF1Q8N442 669 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 KREMEN2Q8NCW0 462 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 GLIS3Q8NEA6 775 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 LNX1Q8TBB1 728 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 B3GALT6Q96L58 329 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 APOL5Q9BWW9 433 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 IKZF4Q9H2S9 585 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 MAN1C1Q9NR34 630 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 CLEC1BQ9P126 229 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 PRKAG3Q9UGI9 489 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 ITGA11Q9UKX5 1188 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 BACE2Q9Y5Z0 518 aa8.99□□□□□ -0.97
PSEN1-209ENST00000553855 TDRD15B5MCY1 1934 aaKnown RBP8.99□□□□□ -0.97
PSEN1-209ENST00000553855 SPTBN5Q9NRC6 3674 aaKnown RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 ERVH48-1M5A8F1 160 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 PSMA7O14818 248 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 TGFB1I1O43294 461 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 HUS1O60921 280 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 XYLBO75191 536 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 GLP2RO95838 553 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 BMP1P13497 986 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 CPB1P15086 417 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 IL9P15248 144 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 RPL17P18621 184 aaKnown RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 TYMPP19971 482 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 OR1D2P34982 312 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 SCTRP47872 440 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 GUCY2FP51841 1108 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 AP3M2P53677 418 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 WNT7BP56706 349 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 DLX2Q07687 328 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 SNW1Q13573 536 aaKnown RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 PSMD6Q15008 389 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 SMAD2Q15796 467 aaKnown RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 ZNF658Q5TYW1 1059 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 CEP135Q66GS9 1140 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 CBWD2Q8IUF1 395 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 WDR49Q8IV35 697 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms