RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 KIAA0895Q8NCT3 520 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 BTBD10Q9BSF8 475 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PACSIN1Q9BY11 444 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 NT5C3AQ9H0P0 336 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 AMFRQ9UKV5 643 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PCDHA1Q9Y5I3 950 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PTCH2Q9Y6C5 1203 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 CCDC162PA2VCL2 907 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 ADCY3O60266 1144 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PHF2O75151 1096 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 FGGP02679 453 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
CFAP54-204ENST00000553778 BRAFP15056 766 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 MCM7P33993 719 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 MLH1P40692 756 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 CCNFP41002 786 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PTGIRP43119 386 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 GSTM4Q03013 218 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 DCTN2Q13561 401 aaKnown RBP10.59□□□□□ -0.71
CFAP54-204ENST00000553778 SLC35G1Q2M3R5 365 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 CFAP157Q5JU67 520 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 MCF2L2Q86YR7 1114 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 CROCCP3Q8IVE0 287 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 RIBC1Q8N443 379 aaPredicted RBP10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 USP6NLQ92738 828 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 ART4Q93070 314 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 UBN1Q9NPG3 1134 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 FAIMQ9NVQ4 179 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 NAGPAQ9UK23 515 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 DBR1Q9UK59 544 aaKnown RBP10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PCDHA3Q9Y5H8 950 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
CFAP54-204ENST00000553778 PFASO15067 1338 aa10.59□□□□□ -0.71
CFAP54-204ENST00000553778 MGAMO43451 1857 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 SMIM23A6NLE4 172 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 PGK2P07205 417 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 UBTFL6P0CB48 400 aaPredicted RBP10.58□□□□□ -0.72
CFAP54-204ENST00000553778 SERPINB3P29508 390 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 GRK4P32298 578 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 TXKP42681 527 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 NR1H3Q13133 447 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 MAP7D3Q8IWC1 876 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 C10orf82Q8WW14 230 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 KCNN1Q92952 543 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 MPP4Q96JB8 637 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 FAM81BQ96LP2 452 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 TSG101Q99816 390 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 ECSITQ9BQ95 431 aa10.58□□□□□ -0.72
CFAP54-204ENST00000553778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.58□□□□□ -0.72
CFAP54-204ENST00000553778 CADM1Q9BY67 442 aaKnown RBP10.58□□□□□ -0.72
CFAP54-204ENST00000553778 UTP6Q9NYH9 597 aaKnown RBP10.58□□□□□ -0.72
CFAP54-204ENST00000553778 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
CFAP54-204ENST00000553778 ARMCX3Q9UH62 379 aaPredicted RBP10.58□□□□□ -0.72
CFAP54-204ENST00000553778 TMEM247A6NEH6 219 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 NKRFO15226 690 aaKnown RBP eCLIP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 GSC2O15499 205 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 KRT36O76013 467 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 ALDH2P05091 517 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 HOXC6P09630 235 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 SPATA31D3P0C874 917 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 VARSP26640 1264 aaKnown RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 RAP1GDS1P52306 607 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 SESN3P58005 492 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 ASIC1P78348 528 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 PDE1BQ01064 536 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 CLPPQ16740 277 aaPredicted RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 CTC1Q2NKJ3 1217 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 P3H1Q32P28 736 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 HSP90AA5PQ58FG0 334 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 DUS1LQ6P1R4 473 aaKnown RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 RNF207Q6ZRF8 634 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 SPATA31D4Q6ZUB0 917 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 SCUBE1Q8IWY4 988 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 NUP93Q8N1F7 819 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 ATP11CQ8NB49 1132 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 MGARPQ8TDB4 240 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 APBA2Q99767 749 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 MIPEPQ99797 713 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 TRIM31Q9BZY9 425 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 SH3GLB2Q9NR46 395 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 PHTF1Q9UMS5 762 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 NCANO14594 1321 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 FRMPD4Q14CM0 1322 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 KANSL1LA0AUZ9 987 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 NFIBO00712 420 aa10.57□□□□□ -0.72
CFAP54-204ENST00000553778 DDX3YO15523 660 aaKnown RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 TPD52L2O43399 206 aaKnown RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 EDF1O60869 148 aaKnown RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
CFAP54-204ENST00000553778 H2AFZP0C0S5 128 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms