RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ANAPC5Q9UJX4 755 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 EFR3BQ9Y2G0 817 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TMEM191CA6NGB0 347 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TMEM191BP0C7N4 346 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ADCY8P40145 1251 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TFDP1Q14186 410 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 MMS22LQ6ZRQ5 1243 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 SEC16BQ96JE7 1060 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC114Q96M63 670 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 FRMD8P1Q9BZ68 369 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 TRIM7Q9C029 511 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ADAM7Q9H2U9 754 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 FAM124BQ9H5Z6 455 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
SHMT2-205ENST00000553474 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 ACTL7BQ9Y614 415 aa13.68□□□□□ -0.22
SHMT2-205ENST00000553474 FAM170AA1A519 330 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-205ENST00000553474 B4GALT4O60513 344 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 ABHD2P08910 425 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 DRD4P21917 467 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
SHMT2-205ENST00000553474 VEGFBP49765 207 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 LIG3P49916 1009 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 ITGA8P53708 1063 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-205ENST00000553474 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
SHMT2-205ENST00000553474 NOGQ13253 232 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 MOGSQ13724 837 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 ITIH4Q14624 930 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 TSHZ1Q6ZSZ6 1077 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 POLNQ7Z5Q5 900 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC25Q86WR0 208 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
SHMT2-205ENST00000553474 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
SHMT2-205ENST00000553474 GOLGA6L7A0A1B0GV03 622 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 IL18RAPO95256 599 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 PRKCBP05771 671 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 GHRP10912 638 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 PROZP22891 400 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 GSCP56915 257 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-205ENST00000553474 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 LAMTOR4Q0VGL1 99 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 SREBF2Q12772 1141 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 IFT88Q13099 833 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 TRPC3Q13507 836 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 SNX1Q13596 522 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 STAT4Q14765 748 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 LACTB2Q53H82 288 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ZBTB41Q5SVQ8 909 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 CNPY4Q8N129 248 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 EPS8L3Q8TE67 593 aaKnown RBP13.66□□□□□ -0.22
SHMT2-205ENST00000553474 TTC25Q96NG3 672 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 TCHPQ9BT92 498 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 LHX5Q9H2C1 402 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 LGALS13Q9UHV8 139 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 THSD7BQ9C0I4 1608 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ANK1P16157 1881 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 PDHXO00330 501 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ACKR2O00590 384 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 MED7O43513 233 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 CDH16O75309 829 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 TNNC2P02585 160 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 KLRC2P26717 231 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 TAS2R40P59535 323 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ACTN3Q08043 901 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-205ENST00000553474 NR1H3Q13133 447 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 DNAJC24Q6P3W2 148 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 MPZL3Q6UWV2 235 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 PACS2Q86VP3 889 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 PASD1Q8IV76 773 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 CCDC197Q8NCU1 140 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 FNIP1Q8TF40 1166 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 ANKRD36BP1Q96IX9 119 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 CISHQ9NSE2 258 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
SHMT2-205ENST00000553474 H0YHG0 523 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 ABLIM1O14639 778 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 EDN1P05305 212 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 CYP2C8P10632 490 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 TFDP3Q5H9I0 405 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms