RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 ZNF667Q5HYK9 610 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 LMBRD2Q68DH5 695 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 SPOPLQ6IQ16 392 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 GDF6Q6KF10 455 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 MON1BQ7L1V2 547 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 RNF180Q86T96 592 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 FAM228AQ86W67 206 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 PDCL2Q8N4E4 241 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 WDTC1Q8N5D0 677 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 RBBP8NLQ8NC74 664 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 SMG8Q8ND04 991 aaKnown RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 LENG1Q96BZ8 264 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 OSMRQ99650 979 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 ARID3AQ99856 593 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 BARX2Q9UMQ3 279 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 UBQLN1Q9UMX0 589 aaKnown RBP10.47□□□□□ -0.73
TMEM116-216ENST00000552800 COG5Q9UP83 839 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 ALG6Q9Y672 507 aa10.47□□□□□ -0.73
TMEM116-216ENST00000552800 CCDC151A5D8V7 595 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 GPR182O15218 404 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 DDX3YO15523 660 aaKnown RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 BUB1BO60566 1050 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 FKTNO75072 461 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CSDE1O75534 798 aaKnown RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CLSTN1O94985 981 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 WEE2P0C1S8 567 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CTNNA2P26232 953 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CCND3P30281 292 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 GNA15P30679 374 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 MAN1A1P33908 653 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 PNPLA4P41247 253 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 GABRB2P47870 512 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 RPL34P49207 117 aaKnown RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 VEGFBP49765 207 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CDK7P50613 346 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 YARSP54577 528 aaKnown RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 RAD23BP54727 409 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 FAM189BP81408 668 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 TAP1Q03518 808 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 TRIM32Q13049 653 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 PPP2R5EQ16537 467 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 TMEM270Q6UE05 265 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CXCL17Q6UXB2 119 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 CRYBG2Q8N1P7 616 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 LRRN4CLQ8ND94 238 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 SPATA4Q8NEY3 305 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 SPATA18Q8TC71 538 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 COG1Q8WTW3 980 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 ARHGEF26Q96DR7 871 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 ZMAT2Q96NC0 199 aaKnown RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 MMS19Q96T76 1030 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 MRPL47Q9HD33 250 aaKnown RBP10.46□□□□□ -0.73
TMEM116-216ENST00000552800 ERVK-5Q9HDB9 667 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 ACP6Q9NPH0 428 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 FAM53CQ9NYF3 392 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 AMFRQ9UKV5 643 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 PCDHB4Q9Y5E5 795 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 PCDHA3Q9Y5H8 950 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 UMODL1Q5DID0 1318 aa10.46□□□□□ -0.73
TMEM116-216ENST00000552800 SCN1AP35498 2009 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 SMIM28A0A1B0GU29 152 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 MED7O43513 233 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 TRPA1O75762 1119 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 NPTXRO95502 500 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 PGK1P00558 417 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 ITGB3P05106 788 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 VDRP11473 427 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 SKIP12755 728 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 KRT5P13647 590 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 CAPN2P17655 700 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 MCM3P25205 808 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 PAFAH1B1P43034 410 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 NOP2P46087 812 aaKnown RBP10.45□□□□□ -0.74
TMEM116-216ENST00000552800 ACLYP53396 1101 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 MYO1EQ12965 1108 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 BRD3Q15059 726 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 WDR72Q3MJ13 1102 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 PKDCCQ504Y2 493 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 NIPA2Q8N8Q9 360 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 SLC4A11Q8NBS3 891 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
TMEM116-216ENST00000552800 TMEM35BQ8NCS4 154 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 GSTCDQ8NEC7 633 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 BEST2Q8NFU1 509 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 FNIP1Q8TF40 1166 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 STK32AQ8WU08 396 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.45□□□□□ -0.74
TMEM116-216ENST00000552800 CYFIP2Q96F07 1278 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 TMEM176AQ96HP8 235 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 HPDLQ96IR7 371 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 ZNF668Q96K58 619 aaPredicted RBP10.45□□□□□ -0.74
TMEM116-216ENST00000552800 ZSWIM1Q9BR11 485 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 SELENOOQ9BVL4 669 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 PRR14Q9BWN1 585 aa10.45□□□□□ -0.74
TMEM116-216ENST00000552800 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
TMEM116-216ENST00000552800 FAM49AQ9H0Q0 323 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms