RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 DSEQ9UL01 958 aa10.57□□□□□ -0.72
PFDN5-218ENST00000552742 L1RE1Q9UN81 338 aa10.57□□□□□ -0.72
PFDN5-218ENST00000552742 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
PFDN5-218ENST00000552742 WDR87Q6ZQQ6 2873 aa10.57□□□□□ -0.72
PFDN5-218ENST00000552742 TRIM49BA6NDI0 452 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 CETN3O15182 167 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 MAPK13O15264 365 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 VNN1O95497 513 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 TRIM49P0CI25 452 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 TRIM49CP0CI26 452 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 CCNE1P24864 410 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 VAMP7P51809 220 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 AP3M2P53677 418 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 NTHL1P78549 312 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 DUSP4Q13115 394 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 GPR17Q13304 367 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 BIRC3Q13489 604 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 TRPC3Q13507 836 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 TDRD10Q5VZ19 366 aaKnown RBP10.56□□□□□ -0.72
PFDN5-218ENST00000552742 KLHL10Q6JEL2 608 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 CYP26C1Q6V0L0 522 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 CCDC149Q6ZUS6 474 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 LIMS2Q7Z4I7 341 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 GRASPQ7Z6J2 395 aaPredicted RBP10.56□□□□□ -0.72
PFDN5-218ENST00000552742 OSTM1Q86WC4 334 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 RNF135Q8IUD6 432 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 ATAD1Q8NBU5 361 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 DHTKD1Q96HY7 919 aaPredicted RBP10.56□□□□□ -0.72
PFDN5-218ENST00000552742 TSG101Q99816 390 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
PFDN5-218ENST00000552742 RHOBTB2Q9BYZ6 727 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 ZCWPW1Q9H0M4 648 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 CLSTN2Q9H4D0 955 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
PFDN5-218ENST00000552742 HCFC1R1Q9NWW0 138 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
PFDN5-218ENST00000552742 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 C2CD4DB7Z1M9 353 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 PSMA7O14818 248 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 IKBKBO14920 756 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 HCRTO43612 131 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 N4BP1O75113 896 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 XYLBO75191 536 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 PDGFRBP09619 1106 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 KRT13P13646 458 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 ACAT1P24752 427 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 LMO2P25791 158 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 GCLMP48507 274 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 FKBP3Q00688 224 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 PPP3CAQ08209 521 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 STIM1Q13586 685 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 NCOA4Q13772 614 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 SLC39A12Q504Y0 691 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 INTS8Q75QN2 995 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 RTL10Q7L3V2 364 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 TMEM86AQ8N2M4 240 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 TOP6BLQ8N6T0 577 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 NELFBQ8WX92 580 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 GBP4Q96PP9 640 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 MMS19Q96T76 1030 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 CRISPLD1Q9H336 500 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 DNMT3BQ9UBC3 853 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
PFDN5-218ENST00000552742 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 MAFFQ9ULX9 164 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 INSL5Q9Y5Q6 135 aa10.55□□□□□ -0.72
PFDN5-218ENST00000552742 GABRDO14764 452 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 ATP2C2O75185 946 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 SOAT2O75908 522 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 HLA-DRAP01903 254 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 LRG1P02750 347 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 PTPN2P17706 415 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 HOXA9P31269 272 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 ATICP31939 592 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 GNL1P36915 607 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-218ENST00000552742 LHX1P48742 406 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 CDH8P55286 799 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 STX17P56962 302 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 MCCD1P59942 119 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-218ENST00000552742 LRRC63Q05C16 580 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 ZACNQ401N2 412 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 OTOP3Q7RTS5 596 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 ZC3H3Q8IXZ2 948 aaKnown RBP10.54□□□□□ -0.72
PFDN5-218ENST00000552742 ADGRF2Q8IZF7 708 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 TTC9BQ8N6N2 239 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 GPT2Q8TD30 523 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 KBTBD7Q8WVZ9 684 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 SYAP1Q96A49 352 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-218ENST00000552742 MYADMQ96S97 322 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 ACBD6Q9BR61 282 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 MRPL45Q9BRJ2 306 aaKnown RBP10.54□□□□□ -0.72
PFDN5-218ENST00000552742 EPHX3Q9H6B9 360 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 MMRN2Q9H8L6 949 aa10.54□□□□□ -0.72
PFDN5-218ENST00000552742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.54□□□□□ -0.729e-15■■■■■ 186.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms