RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ZNF398Q8TD17 642 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 GTF3C2Q8WUA4 911 aaPredicted RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 PPP1R14BQ96C90 147 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CCDC77Q9BR77 488 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CIDEBQ9UHD4 219 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 TBX20Q9UMR3 447 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ADGRA3Q8IWK6 1321 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 LCTP09848 1927 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SMIM23A6NLE4 172 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ANKRD63C9JTQ0 380 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ZWINTO95229 277 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 PSAPP07602 524 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 OSBPP22059 807 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 RFX1P22670 979 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 PTPN4P29074 926 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ADSSP30520 456 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 RFC5P40937 340 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SNAPC2Q13487 334 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ZNF568Q3ZCX4 644 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 EPC2Q52LR7 807 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 HHATQ5VTY9 493 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SWSAP1Q6NVH7 229 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 DLK2Q6UY11 383 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SYDE1Q6ZW31 735 aaPredicted RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.544e-6■□□□□ 9.5
TUBA1C-209ENST00000552448 LONP2Q86WA8 852 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 NCAPG2Q86XI2 1143 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 MAP4K3Q8IVH8 894 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ATP6V0A1Q93050 837 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CLMNQ96JQ2 1002 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CEP170P1Q96L14 293 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 RMDN2Q96LZ7 410 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 OLFM3Q96PB7 478 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SUDS3Q9H7L9 328 aaPredicted RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 JPH1Q9HDC5 661 aaPredicted RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 PDLIM7Q9NR12 457 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 WHRNQ9P202 907 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 GGT7Q9UJ14 662 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 COMMD3-BMI1R4GMX3 469 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 ARID2Q68CP9 1835 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 PMM2O15305 246 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■■■■■ 36
TUBA1C-209ENST00000552448 SLC25A27O95847 323 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 BRAFP15056 766 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 GCLMP48507 274 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 CACNA2D1P54289 1103 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 ACTR2P61160 394 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 CYP1B1Q16678 543 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 C11orf63Q6NUN7 778 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 CCDC60Q8IWA6 550 aaPredicted RBP11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 U2AF1L4Q8WU68 220 aaKnown RBP11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 KIFC3Q9BVG8 833 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 TBC1D10AQ9BXI6 508 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 MYLK2Q9H1R3 596 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 C17orf75Q9HAS0 396 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 LMCD1Q9NZU5 365 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC9A2Q9UBY0 812 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 ZNF212Q9UDV6 495 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 EXOC7Q9UPT5 735 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 DOCK5Q9H7D0 1870 aa11.66□□□□□ -0.54
TUBA1C-209ENST00000552448 DENND3A2RUS2 1198 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SIGLEC16A6NMB1 481 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 FOXN3O00409 490 aaPredicted RBP11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 LRRN2O75325 713 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 TJP3O95049 919 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 ADRB2P07550 413 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 MAN1A1P33908 653 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 TUBP50607 506 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 GALCP54803 685 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SOX10P56693 466 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SP2Q02086 613 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC34A1Q06495 639 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 CETN1Q12798 172 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 DMP1Q13316 513 aaPredicted RBP11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 KIF22Q14807 665 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 LRRC14Q15048 493 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 ARHGAP44Q17R89 818 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 GATA6Q92908 595 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SLCO2A1Q92959 643 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 AZIN2Q96A70 460 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC10A4Q96EP9 437 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 CENPKQ9BS16 269 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SPATC1LQ9H0A9 340 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 MMADHCQ9H3L0 296 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms