RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 GZF1Q9H116 711 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 NUP62CLQ9H1M0 184 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 LMBRD1Q9NUN5 540 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 L1RE1Q9UN81 338 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 BICDL2A1A5D9 508 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 CLDN10P78369 228 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 GPR17Q13304 367 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 TDRD10Q5VZ19 366 aaKnown RBP19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 ANKRD40Q6AI12 368 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 TCEAL8Q8IYN2 117 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 TDRD5Q8NAT2 981 aaKnown RBP19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 ZNF516Q92618 1163 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 ZNF707Q96C28 371 aaPredicted RBP19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 EEF2KMTQ96G04 330 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 PGLYRP2Q96PD5 576 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 MMS19Q96T76 1030 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 CTNND2Q9UQB3 1225 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 C2orf16Q68DN1 1984 aa19.84■□□□□ 0.77
PRPF40B-216ENST00000552301 CLUHO75153 1309 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 TRIM49BA6NDI0 452 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 IKBKBO14920 756 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 SLC16A3O15427 465 aaKnown RBP19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 ATICP31939 592 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 PIK3CAP42336 1068 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 LHX1P48742 406 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 DLG4P78352 724 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 ENPEPQ07075 957 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 NCOA4Q13772 614 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 ZNF699Q32M78 642 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 RNF19BQ6ZMZ0 732 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 DPH6Q7L8W6 267 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 DCP1BQ8IZD4 617 aaKnown RBP19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 ELMOD1Q8N336 334 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 OR10T2Q8NGX3 314 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 NELFBQ8WX92 580 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 WDR6Q9NNW5 1121 aaKnown RBP19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 DDX43Q9NXZ2 648 aaKnown RBP19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 INSL5Q9Y5Q6 135 aa19.83■□□□□ 0.77
PRPF40B-216ENST00000552301 C19orf67A6NJJ6 358 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 STX10O60499 249 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 CST3P01034 146 aaPredicted RBP19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 C4BPAP04003 597 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 POU2F2P09086 479 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 TRIM49P0CI25 452 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 TRIM49CP0CI26 452 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 CD44P16070 742 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 PCSK1P29120 753 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 PMS1P54277 932 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 MYL6P60660 151 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 PAK1Q13153 545 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 PLD1Q13393 1074 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 WDR72Q3MJ13 1102 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 SLC39A12Q504Y0 691 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 SCARA3Q6AZY7 606 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 OTOP3Q7RTS5 596 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 ACSF2Q96CM8 615 aaPredicted RBP19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 TMEM209Q96SK2 561 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 IMPG2Q9BZV3 1241 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 ZCWPW1Q9H0M4 648 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 MMRN2Q9H8L6 949 aa19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 NXF1Q9UBU9 619 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-216ENST00000552301 XIRP2A4UGR9 3374 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 MTMR11A4FU01 709 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 LOC730098B7Z3J9 87 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 PPP1R3GB7ZBB8 358 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 PAPLNO95428 1278 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 SEC24AO95486 1093 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 STAU1O95793 577 aaKnown RBP19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 BMP6P22004 513 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 SMARCB1Q12824 385 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 SOWAHAQ2M3V2 549 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 ZACNQ401N2 412 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 ZNF667Q5HYK9 610 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 TCERG1LQ5VWI1 586 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 SV2AQ7L0J3 742 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 CCDC150Q8NCX0 1101 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 FEZF2Q8TBJ5 459 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 USTQ9Y2C2 406 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 YIPF1Q9Y548 306 aa19.81■□□□□ 0.76
PRPF40B-216ENST00000552301 DENND4AQ7Z401 1863 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 P4HA1P13674 534 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 GBP2P32456 591 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 GCLMP48507 274 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 TWF1Q12792 350 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 DUSP4Q13115 394 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 NFE2Q16621 373 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 SGSM1Q2NKQ1 1148 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 CCDC40Q4G0X9 1142 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 DCAF17Q5H9S7 520 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 IQCEQ6IPM2 695 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 GET4Q7L5D6 327 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 GRASPQ7Z6J2 395 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 ZC3H3Q8IXZ2 948 aaKnown RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 ATAD1Q8NBU5 361 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 C2orf15Q8WU43 125 aaKnown RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 CEP63Q96MT8 703 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 RTP3Q9BQQ7 232 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 ACBD6Q9BR61 282 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 SNX25Q9H3E2 840 aa19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 CD320Q9NPF0 282 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms