RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ARPP19P56211 112 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 MYL7Q01449 175 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 ROR1Q01973 937 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 MYL5Q02045 173 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 KCNH2Q12809 1159 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 ELMSAN1Q6PJG2 1045 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 LIMS2Q7Z4I7 341 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 PI4K2AQ9BTU6 479 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 BARX2Q9UMQ3 279 aaPredicted RBP20.01■□□□□ 0.79
DDX54-209ENST00000551912 COQ4Q9Y3A0 265 aa20.01■□□□□ 0.79
DDX54-209ENST00000551912 PMM2O15305 246 aa20■□□□□ 0.79
DDX54-209ENST00000551912 AFPP02771 609 aaKnown RBP20■□□□□ 0.79
DDX54-209ENST00000551912 FAM163BP0C2L3 166 aa20■□□□□ 0.79
DDX54-209ENST00000551912 CPB1P15086 417 aa20■□□□□ 0.79
DDX54-209ENST00000551912 KCNA5P22460 613 aa20■□□□□ 0.79
DDX54-209ENST00000551912 LHX1P48742 406 aa20■□□□□ 0.79
DDX54-209ENST00000551912 NOP14P78316 857 aaKnown RBP20■□□□□ 0.79
DDX54-209ENST00000551912 DLX2Q07687 328 aaPredicted RBP20■□□□□ 0.79
DDX54-209ENST00000551912 CETN1Q12798 172 aa20■□□□□ 0.79
DDX54-209ENST00000551912 HSP90AA4PQ58FG1 418 aa20■□□□□ 0.79
DDX54-209ENST00000551912 SPOPLQ6IQ16 392 aa20■□□□□ 0.79
DDX54-209ENST00000551912 LILRA6Q6PI73 481 aa20■□□□□ 0.79
DDX54-209ENST00000551912 SEMA4DQ92854 862 aa20■□□□□ 0.79
DDX54-209ENST00000551912 ELMO3Q96BJ8 720 aa20■□□□□ 0.79
DDX54-209ENST00000551912 RTP3Q9BQQ7 232 aa20■□□□□ 0.79
DDX54-209ENST00000551912 PRDM6Q9NQX0 595 aa20■□□□□ 0.79
DDX54-209ENST00000551912 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20■□□□□ 0.79
DDX54-209ENST00000551912 SAMSN1Q9NSI8 373 aaKnown RBP20■□□□□ 0.79
DDX54-209ENST00000551912 DZANK1Q9NVP4 752 aa20■□□□□ 0.79
DDX54-209ENST00000551912 DDX43Q9NXZ2 648 aaKnown RBP20■□□□□ 0.79
DDX54-209ENST00000551912 CLEC1BQ9P126 229 aa20■□□□□ 0.79
DDX54-209ENST00000551912 POLIQ9UNA4 740 aa20■□□□□ 0.79
DDX54-209ENST00000551912 WDR27A2RRH5 827 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 GABRDO14764 452 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 P4HA2O15460 535 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 TACC1O75410 805 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 SPATA31D3P0C874 917 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 WDR44Q5JSH3 913 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 TPGS2Q68CL5 300 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 ANKRD54Q6NXT1 300 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 SPATA31D4Q6ZUB0 917 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 KREMEN2Q8NCW0 462 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 OR10T2Q8NGX3 314 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 ZNF461Q8TAF7 563 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 HDAC7Q8WUI4 952 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 KBTBD7Q8WVZ9 684 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 BPIFA3Q9BQP9 254 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 PLEKHA4Q9H4M7 779 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 MAN1C1Q9NR34 630 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 THEGQ9P2T0 379 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 PLXNA3P51805 1871 aa19.99■□□□□ 0.79
DDX54-209ENST00000551912 SPDYE4A6NLX3 237 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 KCNJ18B7U540 433 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 LRRN2O75325 713 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 ABLIM3O94929 683 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 OR4Q2P0C623 313 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 HOXB8P17481 243 aaPredicted RBP19.98■□□□□ 0.79
DDX54-209ENST00000551912 WARSP23381 471 aaKnown RBP19.98■□□□□ 0.79
DDX54-209ENST00000551912 EEF1GP26641 437 aaKnown RBP19.98■□□□□ 0.79
DDX54-209ENST00000551912 KCNJ12Q14500 433 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 MAN2A1Q16706 1144 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 SCARA5Q6ZMJ2 495 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 OSTM1Q86WC4 334 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 AOPEPQ8N6M6 819 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 TMEM209Q96SK2 561 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 ACBD6Q9BR61 282 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 MRPL45Q9BRJ2 306 aaKnown RBP19.98■□□□□ 0.79
DDX54-209ENST00000551912 SNX25Q9H3E2 840 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 SMYD3Q9H7B4 428 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 APOBEC3GQ9HC16 384 aaKnown RBP19.98■□□□□ 0.79
DDX54-209ENST00000551912 FANCLQ9NW38 375 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 FBXW11Q9UKB1 542 aa19.98■□□□□ 0.79
DDX54-209ENST00000551912 H3BQ06 376 aaPredicted RBP19.97■□□□□ 0.79
DDX54-209ENST00000551912 ATF2P15336 505 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 PCSK1P29120 753 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 ELF1P32519 619 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 GNL1P36915 607 aaPredicted RBP19.97■□□□□ 0.79
DDX54-209ENST00000551912 ZNF165P49910 485 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 TSPY1Q01534 308 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 GPR17Q13304 367 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 TCP11X2Q5H9J9 407 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 LIN9Q5TKA1 542 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 OR6B3Q8NGW1 331 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 FAXDC2Q96IV6 333 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 MSLNLQ96KJ4 702 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 TUBGCP2Q9BSJ2 902 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 NIF3L1Q9GZT8 377 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 ZCWPW1Q9H0M4 648 aa19.97■□□□□ 0.79
DDX54-209ENST00000551912 AFF4Q9UHB7 1163 aaKnown RBP19.97■□□□□ 0.79
DDX54-209ENST00000551912 PRKCSHP14314 528 aaPredicted RBP19.96■□□□□ 0.79
DDX54-209ENST00000551912 ACAT1P24752 427 aaKnown RBP19.96■□□□□ 0.79
DDX54-209ENST00000551912 ASPAP45381 313 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 RAP1GAPP47736 663 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 CDH8P55286 799 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 NCAPHQ15003 741 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 SLC39A12Q504Y0 691 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 SYCE2Q6PIF2 218 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 RNF19BQ6ZMZ0 732 aa19.96■□□□□ 0.79
DDX54-209ENST00000551912 DCP1BQ8IZD4 617 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms