RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LRG1P02750 347 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 PRCPP42785 496 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 SMARCB1Q12824 385 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 STIM1Q13586 685 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 CENPPQ6IPU0 288 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 RNF19BQ6ZMZ0 732 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 DPH6Q7L8W6 267 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 ZDHHC14Q8IZN3 488 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 PDCL2Q8N4E4 241 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 ZNF516Q92618 1163 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 TSG101Q99816 390 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 RTP3Q9BQQ7 232 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 MKNK1Q9BUB5 465 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 ZCWPW1Q9H0M4 648 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 HSFX1Q9UBD0 423 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 MAN1B1Q9UKM7 699 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 SCN1AP35498 2009 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 MTMR11A4FU01 709 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 IKBKBO14920 756 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 SEC24AO95486 1093 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 OR4Q2P0C623 313 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 SP100P23497 879 aaPredicted RBP16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 ATICP31939 592 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 PSMC2P35998 433 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 LRRC63Q05C16 580 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 PLD1Q13393 1074 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 ADAM9Q13443 819 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 TRPC3Q13507 836 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 HFE2Q6ZVN8 426 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 LIMS2Q7Z4I7 341 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 ADGRF2Q8IZF7 708 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 C2orf15Q8WU43 125 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 VRTNQ9H8Y1 702 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 YIPF1Q9Y548 306 aa16.56■□□□□ 0.24
PRPF40B-211ENST00000551063 TSC2P49815 1807 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 GABRDO14764 452 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 PSMA7O14818 248 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 CETN3O15182 167 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 VNN2O95498 520 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 C4BPAP04003 597 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 KRT13P13646 458 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 LHX1P48742 406 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 MYL7Q01449 175 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 TSPY1Q01534 308 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 BIRC3Q13489 604 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 ZACNQ401N2 412 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 TDRD10Q5VZ19 366 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 BMP8AQ7Z5Y6 402 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 ZC3H3Q8IXZ2 948 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 DCP1BQ8IZD4 617 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 TRIML1Q8N9V2 468 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 GBP4Q96PP9 640 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 ACBD6Q9BR61 282 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 AVENQ9NQS1 362 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
PRPF40B-211ENST00000551063 DENND4AQ7Z401 1863 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 PHACTR2O75167 634 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 FSHRP23945 695 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 PCSK1P29120 753 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 VAMP7P51809 220 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 MCCD1P59942 119 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 DLG4P78352 724 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 MORC3Q14149 939 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 SOWAHAQ2M3V2 549 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 SLC39A12Q504Y0 691 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 INTS6LQ5JSJ4 861 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 TRIM67Q6ZTA4 783 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 GET4Q7L5D6 327 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 ELMOD1Q8N336 334 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 SPPL2BQ8TCT7 592 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 DHTKD1Q96HY7 919 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 PGLYRP2Q96PD5 576 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 XYLT2Q9H1B5 865 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 DDX43Q9NXZ2 648 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 EPS15L1Q9UBC2 864 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 ZFP37Q9Y6Q3 630 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 MTCL1Q9Y4B5 1905 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 C5orf42Q9H799 3197 aa16.54■□□□□ 0.24
PRPF40B-211ENST00000551063 SLC16A3O15427 465 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 TACC1O75410 805 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 EPB41P11171 864 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 WARSP23381 471 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 CCNE1P24864 410 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 MYL6P60660 151 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms