RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 FAM83BQ5T0W9 1011 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 AGAP9Q5VTM2 703 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 HIBCHQ6NVY1 386 aaPredicted RBP5.95□□□□□ -1.46
LIMA1-205ENST00000550592 C1orf228Q6PIY5 440 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 RHOT2Q8IXI1 618 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 DNAJC5GQ8N7S2 189 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 ATP11CQ8NB49 1132 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 PDPRQ8NCN5 879 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 FAM89AQ96GI7 184 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 REXO4Q9GZR2 422 aaKnown RBP5.95□□□□□ -1.46
LIMA1-205ENST00000550592 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
LIMA1-205ENST00000550592 TRMT13Q9NUP7 481 aaKnown RBP5.95□□□□□ -1.46
LIMA1-205ENST00000550592 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 A0A1W2PPC4 97 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 FCER1AP12319 257 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 ACO1P21399 889 aaKnown RBP5.94□□□□□ -1.46
LIMA1-205ENST00000550592 UCP3P55916 312 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 NHLH2Q02577 135 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 CHAF1AQ13111 956 aaPredicted RBP5.94□□□□□ -1.46
LIMA1-205ENST00000550592 FAM160B1Q5W0V3 765 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 CFAP52Q8N1V2 620 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 ZNF808Q8N4W9 903 aaPredicted RBP5.94□□□□□ -1.46
LIMA1-205ENST00000550592 SLC15A4Q8N697 577 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 EDAQ92838 391 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 MARS2Q96GW9 593 aaKnown RBP5.94□□□□□ -1.46
LIMA1-205ENST00000550592 PHACTR3Q96KR7 559 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 SNX22Q96L94 193 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 NEU1Q99519 415 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 CNPPD1Q9BV87 410 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 SPATA5L1Q9BVQ7 753 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 TLR10Q9BXR5 811 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 GPR87Q9BY21 358 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 CERS4Q9HA82 394 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 ARFGAP3Q9NP61 516 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 SERHLQ9NQF3 203 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 GPRC5BQ9NZH0 403 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 JAG2Q9Y219 1238 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 TMX2Q9Y320 296 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 XDHP47989 1333 aa5.94□□□□□ -1.46
LIMA1-205ENST00000550592 DIP2BQ9P265 1576 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 MBD3L4A6NDZ8 208 aaPredicted RBP5.93□□□□□ -1.46
LIMA1-205ENST00000550592 MBD3L3A6NE82 208 aaPredicted RBP5.93□□□□□ -1.46
LIMA1-205ENST00000550592 DIRC3C9JPN6 131 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 PYCARD-AS1I3L0S3 204 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 M0QYG6 137 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 APOL1O14791 398 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 KIF20AO95235 890 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 MT-ND5P03915 603 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 HIBADHP31937 336 aaKnown RBP5.93□□□□□ -1.46
LIMA1-205ENST00000550592 MAN2A2P49641 1150 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 SCNN1GP51170 649 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 STK3Q13188 491 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 KLHDC7AQ5VTJ3 777 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 TSHZ3Q63HK5 1081 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 Q6ZRM9 215 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 LIX1LQ8IVB5 337 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 CCDC33Q8N5R6 958 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 KIAA1191Q96A73 305 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 DCLRE1CQ96SD1 692 aaKnown RBP5.93□□□□□ -1.46
LIMA1-205ENST00000550592 PNKPQ96T60 521 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 WDR12Q9GZL7 423 aaKnown RBP5.93□□□□□ -1.46
LIMA1-205ENST00000550592 VPS11Q9H270 941 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 CD248Q9HCU0 757 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 PTPRHQ9HD43 1115 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 MYO1AQ9UBC5 1043 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 XPR1Q9UBH6 696 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 MAPKBP1O60336 1514 aa5.93□□□□□ -1.46
LIMA1-205ENST00000550592 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 MYO1CO00159 1063 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 ANXA2P07355 339 aaKnown RBP5.92□□□□□ -1.46
LIMA1-205ENST00000550592 IL1R1P14778 569 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 ABCB4P21439 1286 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 FGFR2P21802 821 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 KLRC1P26715 233 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 APOBEC3AP31941 199 aaPredicted RBP5.92□□□□□ -1.46
LIMA1-205ENST00000550592 PPM1AP35813 382 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 WNT3P56703 355 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 PIGFQ07326 219 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 ICAM4Q14773 271 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 ARL13BQ3SXY8 428 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 HS1BP3Q53T59 392 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 ERAP2Q6P179 960 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 TSHZ1Q6ZSZ6 1077 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 UNC13DQ70J99 1090 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 FAM46DQ8NEK8 389 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 VPS37AQ8NEZ2 397 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 OR56A3Q8NH54 315 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 CHST8Q9H2A9 424 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 MRPS18AQ9NVS2 196 aaKnown RBP5.92□□□□□ -1.46
LIMA1-205ENST00000550592 ETAA1Q9NY74 926 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 VSX1Q9NZR4 365 aaPredicted RBP5.92□□□□□ -1.46
LIMA1-205ENST00000550592 HESX1Q9UBX0 185 aa5.92□□□□□ -1.46
LIMA1-205ENST00000550592 SOGA1O94964 1423 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 GRIN2BQ13224 1484 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 A0A1B0GTW7 788 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 GRXCR1A8MXD5 290 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 TMEM233B4DJY2 109 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms