RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 SYNPOQ8N3V7 929 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 MNS1Q8NEH6 495 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ZFP28Q8NHY6 868 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 GOLGA5Q8TBA6 731 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ZNF480Q8WV37 535 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ZNF622Q969S3 477 aaKnown RBP eCLIP3.76□□□□□ -1.818e-11■■■□□ 16.2
CCNT1-203ENST00000550457 EXOC4Q96A65 974 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 MYCBPQ99417 103 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ZSWIM1Q9BR11 485 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 SPATA5L1Q9BVQ7 753 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 TARS2Q9BW92 718 aaKnown RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 FAM107BQ9H098 131 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 NUP62CLQ9H1M0 184 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ZSWIM4Q9H7M6 989 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 TERF2IPQ9NYB0 399 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 STAP2Q9UGK3 403 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 EDARQ9UNE0 448 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 MAP3K4Q9Y6R4 1608 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 CD109Q6YHK3 1445 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 CDC42BPGQ6DT37 1551 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 INO80Q9ULG1 1556 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ARAP3Q8WWN8 1544 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 NPHP3Q7Z494 1330 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 COL3A1P02461 1466 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ABCA9Q8IUA7 1624 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ABCA6Q8N139 1617 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 A0A1B0GUL7 405 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 GOLGA6L4A6NEF3 574 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 LRRC3CA6NJW4 275 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 GOLGA6L19H0YKK7 550 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 KIF1CO43896 1103 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 RBMXL2O75526 392 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 RPS6KA5O75582 802 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 C1RP00736 705 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FOSP01100 380 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FDXRP22570 491 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 HSPA4P34932 840 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CRHR1P34998 444 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FLT3LGP49771 235 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CCT4P50991 539 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 GTF2A1P52655 376 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 PDE1AP54750 535 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 HNRNPH2P55795 449 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CLRN1P58418 232 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 KRTAP10-9P60411 292 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 KRT85P78386 507 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 NHLH1Q02575 133 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 OCA2Q04671 838 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FOXF2Q12947 444 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TUBB2AQ13885 445 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 PDCD1Q15116 288 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TCEA2Q15560 299 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 MST1LQ2TV78 715 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CCDC93Q567U6 631 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CT83Q5H943 113 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FAM47AQ5JRC9 791 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TSHZ3Q63HK5 1081 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ATL3Q6DD88 541 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ARMC6Q6NXE6 501 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CEP85Q6P2H3 762 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FBXO38Q6PIJ6 1188 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 DHX37Q8IY37 1157 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CCAR2Q8N163 923 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 C17orf53Q8N3J3 647 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CCDC150Q8NCX0 1101 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FBXO18Q8NFZ0 1043 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CAGE1Q8TC20 777 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 SLC9A6Q92581 669 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 NELL1Q92832 810 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FUBP1Q96AE4 644 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CHMP4CQ96CF2 233 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 RNPC3Q96LT9 517 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 C16orf45Q96MC5 204 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 NCAPGQ9BPX3 1015 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 DUSP26Q9BV47 211 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TUBB2BQ9BVA1 445 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ALOXE3Q9BYJ1 711 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 UBXN6Q9BZV1 441 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TM6SF1Q9BZW5 370 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TRIM5Q9C035 493 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 NAT10Q9H0A0 1025 aaKnown RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 OSBPL5Q9H0X9 879 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 TNMDQ9H2S6 317 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 SLC12A5Q9H2X9 1139 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CLSTN2Q9H4D0 955 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 SEMA4GQ9NTN9 838 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 FOXJ2Q9P0K8 574 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 BCCIPQ9P287 314 aaKnown RBP eCLIP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 CLIP2Q9UDT6 1046 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ZNF215Q9UL58 517 aaPredicted RBP3.75□□□□□ -1.81
CCNT1-203ENST00000550457 SMC3Q9UQE7 1217 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ATP11BQ9Y2G3 1177 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 PLCH2O75038 1416 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ADGRL3Q9HAR2 1447 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 VWDEQ8N2E2 1590 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 KIAA0232Q92628 1395 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 ARHGAP5Q13017 1502 aa3.75□□□□□ -1.81
CCNT1-203ENST00000550457 SYCP2Q9BX26 1530 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms