RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-206ENST00000550406 LGALS16A8MUM7 142 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 PER2O15055 1255 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 TEX28O15482 410 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 HUS1O60921 280 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 TACC1O75410 805 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 WEE2P0C1S8 567 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 IGFBP4P22692 258 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 WARSP23381 471 aaKnown RBP13.97□□□□□ -0.17
RAB5C-206ENST00000550406 GTF2F1P35269 517 aaKnown RBP eCLIP13.97□□□□□ -0.17
RAB5C-206ENST00000550406 KLK7P49862 253 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 TNNC1P63316 161 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 YWHAHQ04917 246 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-206ENST00000550406 NR1I3Q14994 352 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 PTPN21Q16825 1174 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 WDR44Q5JSH3 913 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 GJB7Q6PEY0 223 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 TRIM65Q6PJ69 517 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 ANKS3Q6ZW76 656 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 ADGRF2Q8IZF7 708 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 TMEM86AQ8N2M4 240 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 UBR7Q8N806 425 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 OR10T2Q8NGX3 314 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 WHAMMQ8TF30 809 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 KREMEN1Q96MU8 473 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 MMS19Q96T76 1030 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 ARID3AQ99856 593 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 NIF3L1Q9GZT8 377 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 GCNT4Q9P109 453 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 FBXL5Q9UKA1 691 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 AJAP1Q9UKB5 411 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-206ENST00000550406 DSEQ9UL01 958 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 SIK3Q9Y2K2 1263 aa13.97□□□□□ -0.17
RAB5C-206ENST00000550406 GOLGA6L19H0YKK7 550 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 PES1O00541 588 aaKnown RBP13.96□□□□□ -0.17
RAB5C-206ENST00000550406 AP5Z1O43299 807 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
RAB5C-206ENST00000550406 VNN2O95498 520 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 OR4Q2P0C623 313 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 ACAT1P24752 427 aaKnown RBP13.96□□□□□ -0.17
RAB5C-206ENST00000550406 OR1D2P34982 312 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 HYAL1Q12794 435 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 CETN1Q12798 172 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 KCNC3Q14003 757 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 CCDC142Q17RM4 750 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 CTXN3Q4LDR2 81 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 LILRA6Q6PI73 481 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 RRAGAQ7L523 313 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 LRRTM3Q86VH5 581 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 METTL23Q86XA0 190 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 GLYCTKQ8IVS8 523 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 SPATA18Q8TC71 538 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 SLC22A17Q8WUG5 538 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 NT5C1BQ96P26 610 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 GAS2L1Q99501 681 aaPredicted RBP13.96□□□□□ -0.17
RAB5C-206ENST00000550406 PKMYT1Q99640 499 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 LPIN3Q9BQK8 851 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 IMPG2Q9BZV3 1241 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 NSUN3Q9H649 340 aaKnown RBP13.96□□□□□ -0.17
RAB5C-206ENST00000550406 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
RAB5C-206ENST00000550406 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 CDY1Q9Y6F8 540 aa13.96□□□□□ -0.17
RAB5C-206ENST00000550406 REV3LO60673 3130 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 ARHGEF37A1IGU5 675 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 WDR27A2RRH5 827 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 H7C4K7 107 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 ATP2C2O75185 946 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 NOL4O94818 638 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 PDGFRBP09619 1106 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 ACO1P21399 889 aaKnown RBP13.95□□□□□ -0.18
RAB5C-206ENST00000550406 CA8P35219 290 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 GNL1P36915 607 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-206ENST00000550406 LHX1P48742 406 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
RAB5C-206ENST00000550406 UBXN1Q04323 297 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 INCA1Q0VD86 236 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 CUL2Q13617 745 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 RAB33AQ14088 237 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 DUSP6Q16828 381 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 SLC8B1Q6J4K2 584 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 ZNF280DQ6N043 979 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
RAB5C-206ENST00000550406 CCDC150Q8NCX0 1101 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 ERGIC2Q96RQ1 377 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 TWNKQ96RR1 684 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 ZCWPW1Q9H0M4 648 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 TLE6Q9H808 572 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 CYP3A43Q9HB55 503 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
RAB5C-206ENST00000550406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms