RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	HCFC1R1	Q9NWW0	138 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	EPS15L1	Q9UBC2	864 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	LIMD1	Q9UGP4	676 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	L1RE1	Q9UN81	338 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	SORCS3	Q9UPU3	1222 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	PCDHA5	Q9Y5H7	936 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	SNX9	Q9Y5X1	595 aa		12.84	□□□□□ -0.35
ARFGAP1-223	ENST00000550188	MTMR11	A4FU01	709 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	MAPK13	O15264	365 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	GPR37L1	O60883	481 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	VNN2	O95498	520 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	RPL13	P26373	211 aa	Known RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CASP4	P49662	377 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CLDN10	P78369	228 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	NTHL1	P78549	312 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ZXDA	P98168	799 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TWF1	Q12792	350 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SMARCB1	Q12824	385 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	MTMR3	Q13615	1198 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	EDRF1	Q3B7T1	1238 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SLC39A12	Q504Y0	691 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ZCWPW2	Q504Y3	356 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	COBLL1	Q53SF7	1204 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TMEM31	Q5JXX7	168 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CEP135	Q66GS9	1140 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SCARA3	Q6AZY7	606 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	DPH6	Q7L8W6	267 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	DCP1B	Q8IZD4	617 aa	Known RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ADGRF2	Q8IZF7	708 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PLEKHO2	Q8TD55	490 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TMC2	Q8TDI7	906 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	C2orf15	Q8WU43	125 aa	Known RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	EDA	Q92838	391 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	MYADM	Q96S97	322 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TMEM209	Q96SK2	561 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	AVEN	Q9NQS1	362 aa	Predicted RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	DNMT3B	Q9UBC3	853 aa	Known RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	HSFX1	Q9UBD0	423 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	YIPF1	Q9Y548	306 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TRIP11	Q15643	1979 aa		12.83	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	FAM86C2P	A6NEL3	165 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PHACTR2	O75167	634 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ASGR2	P07307	311 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	RHO	P08100	348 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PTPN2	P17706	415 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ATIC	P31939	592 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PPP1R2	P41236	205 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	LHX1	P48742	406 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	MYL7	Q01449	175 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TSPY1	Q01534	308 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	DUSP4	Q13115	394 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	BIRC3	Q13489	604 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TRPC3	Q13507	836 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SOWAHA	Q2M3V2	549 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	IQCE	Q6IPM2	695 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CENPP	Q6IPU0	288 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	INTS8	Q75QN2	995 aa	Known RBP	12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	UBALD2	Q8IYN6	164 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TRIML1	Q8N9V2	468 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ATAD1	Q8NBU5	361 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ZNF516	Q92618	1163 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ERCC4	Q92889	916 aa	Predicted RBP	12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ACBD6	Q9BR61	282 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CORO1B	Q9BR76	489 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	C11orf16	Q9NQ32	467 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	DDX43	Q9NXZ2	648 aa	Known RBP	12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	KIAA1468	Q9P260	1216 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	IGSF9	Q9P2J2	1179 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CDH7	Q9ULB5	785 aa		12.82	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ANK1	P16157	1881 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	DENND4A	Q7Z401	1863 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PRR33	A8MZF0	331 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	GABRD	O14764	452 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	IKBKB	O14920	756 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	AKAP3	O75969	853 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	STAU1	O95793	577 aa	Known RBP	12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CST3	P01034	146 aa	Predicted RBP	12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	LAMP2	P13473	410 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PCSK1	P29120	753 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PSMC2	P35998	433 aa	Known RBP	12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PRCP	P42785	496 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ALDH1A3	P47895	512 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TUFM	P49411	452 aa	Known RBP	12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	EPHB3	P54753	998 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TNNC1	P63316	161 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SIGLEC14	Q08ET2	396 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ADAM9	Q13443	819 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	CAMK4	Q16566	473 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	TDRD10	Q5VZ19	366 aa	Known RBP	12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	PDZD4	Q76G19	769 aa	Predicted RBP	12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	LIMS2	Q7Z4I7	341 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	FAM186B	Q8IYM0	893 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	LEMD2	Q8NC56	503 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	ITFG1	Q8TB96	612 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	SPPL2B	Q8TCT7	592 aa		12.81	□□□□□ -0.36
ARFGAP1-223	ENST00000550188	FGF13	Q92913	245 aa		12.81	□□□□□ -0.36

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