RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 RHOP08100 348 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 LAMP2P13473 410 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 PTPN2P17706 415 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 PNOCQ13519 176 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 SNW1Q13573 536 aaKnown RBP18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 SLC39A12Q504Y0 691 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 TRAPPC11Q7Z392 1133 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 GUF1Q8N442 669 aaKnown RBP18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 PDCL2Q8N4E4 241 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 ENGASEQ8NFI3 743 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 SPATA18Q8TC71 538 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 MFSD14AQ96MC6 490 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 RTP3Q9BQQ7 232 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 CORO1BQ9BR76 489 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 ZCWPW1Q9H0M4 648 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 KCNK12Q9HB15 430 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 AVENQ9NQS1 362 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 DMAC2Q9NW81 257 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 SNX9Q9Y5X1 595 aa18.53■□□□□ 0.56
CHMP1A-208ENST00000550102 SMC2O95347 1197 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 TSPY1Q01534 308 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 SMARCB1Q12824 385 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 DUSP4Q13115 394 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 TDGQ13569 410 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 IQCEQ6IPM2 695 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 CENPPQ6IPU0 288 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 ADGRF2Q8IZF7 708 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 TOP6BLQ8N6T0 577 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 ITFG1Q8TB96 612 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 FGF13Q92913 245 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 NXPE3Q969Y0 559 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 HSFX1Q9UBD0 423 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 MAPK8IP1Q9UQF2 711 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 TRAF3IP3Q9Y228 551 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 FRMD4BQ9Y2L6 1034 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 MRPS23Q9Y3D9 190 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 HCN4Q9Y3Q4 1203 aa18.52■□□□□ 0.56
CHMP1A-208ENST00000550102 OBSL1O75147 1896 aa18.52■□□□□ 0.55
CHMP1A-208ENST00000550102 DENND4CQ5VZ89 1909 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 KINO60870 393 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 ALDH1A3P47895 512 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 EPHB3P54753 998 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 HTR4Q13639 388 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 CEP135Q66GS9 1140 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 SCARA3Q6AZY7 606 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 HFE2Q6ZVN8 426 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 MTSS1LQ765P7 747 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 NPAS3Q8IXF0 933 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 DCP1BQ8IZD4 617 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 TTC9BQ8N6N2 239 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 ATAD1Q8NBU5 361 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 LEMD2Q8NC56 503 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 C2orf15Q8WU43 125 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 ING5Q8WYH8 240 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 ZNF512Q96ME7 567 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 TIGD1Q96MW7 591 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 GZF1Q9H116 711 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 CRISPLD1Q9H336 500 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 SMOC2Q9H3U7 446 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 ASAH2Q9NR71 780 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 NUP210Q8TEM1 1887 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 MUC6Q6W4X9 2439 aa18.51■□□□□ 0.55
CHMP1A-208ENST00000550102 ANHXE9PGG2 379 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 ZNF197O14709 1029 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 NR2F2P24468 414 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 AP3M2P53677 418 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 MYL7Q01449 175 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 NFIL3Q16649 462 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 CYP4A22Q5TCH4 519 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 PDZD4Q76G19 769 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 SPPL2BQ8TCT7 592 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 PARD3BQ8TEW8 1205 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 ASIC4Q96FT7 647 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 DDX43Q9NXZ2 648 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 ABI2Q9NYB9 513 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 CEP72Q9P209 647 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 DUSP12Q9UNI6 340 aa18.5■□□□□ 0.55
CHMP1A-208ENST00000550102 LRRIQ3A6PVS8 624 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 PHACTR2O75167 634 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 CEBPBP17676 345 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 PCSK1P29120 753 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 LHX1P48742 406 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 CASP4P49662 377 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 EPHA5P54756 1037 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 CLDN10P78369 228 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 BIRC3Q13489 604 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 TRPC3Q13507 836 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 SOWAHAQ2M3V2 549 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 PRSS36Q5K4E3 855 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 DPH6Q7L8W6 267 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 BMP8AQ7Z5Y6 402 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 PLEKHO2Q8TD55 490 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 RSAD2Q8WXG1 361 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 SMARCE1Q969G3 411 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 SEPT5Q99719 369 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms