RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 XXYLT1Q8NBI6 393 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 STKLD1Q8NE28 680 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
HDAC7-229ENST00000549883 FGF14Q92915 247 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 MFSD14AQ96MC6 490 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 ZCWPW1Q9H0M4 648 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 YIPF1Q9Y548 306 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 NME7Q9Y5B8 376 aa10.54□□□□□ -0.72
HDAC7-229ENST00000549883 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
HDAC7-229ENST00000549883 OBSL1O75147 1896 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 PTPRDP23468 1912 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 ANHXE9PGG2 379 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 KIAA0391O15091 583 aaKnown RBP10.53□□□□□ -0.72
HDAC7-229ENST00000549883 ATP2C2O75185 946 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 RHOBTB3O94955 611 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 POU2F2P09086 479 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 PTPN2P17706 415 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 GPR15P49685 360 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 DLG4P78352 724 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 RBP5P82980 135 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 TDGQ13569 410 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 MTMR3Q13615 1198 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 MYBPC2Q14324 1141 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 SOWAHAQ2M3V2 549 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 HS2ST1Q7LGA3 356 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 TRAPPC11Q7Z392 1133 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 WDR49Q8IV35 697 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 SLC44A3Q8N4M1 653 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 LRRC52Q8N7C0 313 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 GPR152Q8TDT2 470 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 MCRS1Q96EZ8 462 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 HPDLQ96IR7 371 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 ZSWIM3Q96MP5 696 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 ZNF560Q96MR9 790 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 KXD1Q9BQD3 176 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 LPIN3Q9BQK8 851 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 LRRC3Q9BY71 257 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 PLA2G2FQ9BZM2 168 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 ZNF334Q9HCZ1 680 aaPredicted RBP10.53□□□□□ -0.72
HDAC7-229ENST00000549883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.53□□□□□ -0.72
HDAC7-229ENST00000549883 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 CDH7Q9ULB5 785 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 MRPS23Q9Y3D9 190 aaKnown RBP10.53□□□□□ -0.72
HDAC7-229ENST00000549883 SNX9Q9Y5X1 595 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 NUMBLQ9Y6R0 609 aa10.53□□□□□ -0.72
HDAC7-229ENST00000549883 GREB1Q4ZG55 1949 aa10.52□□□□□ -0.72
HDAC7-229ENST00000549883 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
HDAC7-229ENST00000549883 EXOC3O60645 756 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 TNNC2P02585 160 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 NR3C1P04150 777 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 CFHP08603 1231 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 MYL4P12829 197 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 ATF6P18850 670 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 TNNI1P19237 187 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 LMO2P25791 158 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 PNPLA4P41247 253 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 PSMD2Q13200 908 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 C1orf220Q5T0J3 134 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 STXBP5Q5T5C0 1151 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 SDHAF4Q5VUM1 108 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 LIMS2Q7Z4I7 341 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 METTL23Q86XA0 190 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 TMC8Q8IU68 726 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 KBTBD7Q8WVZ9 684 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 EEF2KMTQ96G04 330 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 ANKRD36BP1Q96IX9 119 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 PKMYT1Q99640 499 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 CGRRF1Q99675 332 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
HDAC7-229ENST00000549883 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 GDAP2Q9NXN4 497 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 DDX43Q9NXZ2 648 aaKnown RBP10.52□□□□□ -0.73
HDAC7-229ENST00000549883 IGSF9Q9P2J2 1179 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 NCANO14594 1321 aa10.52□□□□□ -0.73
HDAC7-229ENST00000549883 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 PDXKO00764 312 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 HUS1O60921 280 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 LRRN2O75325 713 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 VNN1O95497 513 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 MYL1P05976 194 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 FCARP24071 287 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 MYL6P60660 151 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 SNRPFP62306 86 aaKnown RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 KCNB1Q14721 858 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 SURF1Q15526 300 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 TEAD2Q15562 447 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 TDRD10Q5VZ19 366 aaKnown RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 ISM2Q6H9L7 571 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 TANGO2Q6ICL3 276 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 RTL10Q7L3V2 364 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 BMP8AQ7Z5Y6 402 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 THEM5Q8N1Q8 247 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms